RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 NAA11Q9BSU3 229 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-213ENST00000484112 SRXN1Q9BYN0 137 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 PCDHAC1Q9H158 963 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 OR10A4Q9H209 315 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 TMEM27Q9HBJ8 222 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 SPAG4Q9NPE6 437 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 YAE1D1Q9NRH1 226 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 ZNF701Q9NV72 531 aaPredicted RBP8.87□□□□□ -0.99
CPSF4-213ENST00000484112 SELENONQ9NZV5 590 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 EMC3Q9P0I2 261 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 ABCD2Q9UBJ2 740 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 CLEC4AQ9UMR7 237 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 SLC9A8Q9Y2E8 581 aa8.87□□□□□ -0.99
CPSF4-213ENST00000484112 A0A1W2PNR3 127 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 TMEM72A0PK05 275 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 ELOA3DA6NLF2 546 aaPredicted RBP8.86□□□□□ -0.99
CPSF4-213ENST00000484112 TMEM229AB2RXF0 380 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 HS3ST1O14792 307 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 SMAD9O15198 467 aaKnown RBP8.86□□□□□ -0.99
CPSF4-213ENST00000484112 TPST1O60507 370 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 NPIPB7O75200 414 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 GCM2O75603 506 aaPredicted RBP8.86□□□□□ -0.99
CPSF4-213ENST00000484112 VAMP5O95183 116 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 IFNA2P01563 188 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 OPN1LWP04000 364 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 FESP07332 822 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 PRG2P13727 222 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 PAX1P15863 534 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 PPP3CBP16298 524 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 AGTR1P30556 359 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 IDUAP35475 653 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 NUDT2P50583 147 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 RPS4XP62701 263 aaKnown RBP8.86□□□□□ -0.99
CPSF4-213ENST00000484112 KRTAP1-1Q07627 177 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 KRT72Q14CN4 511 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 MFSD13AQ14CX5 517 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 NRF1Q16656 503 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 DUSP7Q16829 419 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 ELOA3BQ3SY89 546 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 ALG10BQ5I7T1 473 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 ABLIM2Q6H8Q1 611 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 PODNL1Q6PEZ8 512 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 PAQR6Q6TCH4 344 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 SSX8Q7RTT4 187 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 MICU2Q8IYU8 434 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 ZNF611Q8N823 705 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 ELOA3Q8NG57 546 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 LZICQ8WZA0 190 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 AKAP1Q92667 903 aaKnown RBP eCLIP8.86□□□□□ -0.99
CPSF4-213ENST00000484112 PROX1Q92786 737 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 SLC38A4Q969I6 547 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 TAMM41Q96BW9 452 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 ARL5BQ96KC2 179 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 EPYCQ99645 322 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 PSD2Q9BQI7 771 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 SF3B5Q9BWJ5 86 aaKnown RBP8.86□□□□□ -0.99
CPSF4-213ENST00000484112 TAPBPLQ9BX59 468 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 ALG2Q9H553 416 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 TAGLN3Q9UI15 199 aa8.86□□□□□ -0.99
CPSF4-213ENST00000484112 A0A087WUJ7 227 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 A0A0B4J2E0 115 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 A0A1B0GX12 115 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 LIPT2A6NK58 231 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 AHSA1O95433 338 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 CD247P20963 164 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 KDELR2P33947 212 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 SELENOWP63302 87 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 LIPEQ05469 1076 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 RASGEF1BQ0VAM2 473 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 C1QTNF12Q5T7M4 302 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 C1orf140Q5VVS0 124 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 GALNT5Q7Z7M9 940 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 SMYD1Q8NB12 490 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 CCDC197Q8NCU1 140 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 MFSD8Q8NHS3 518 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 ABHD3Q8WU67 409 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 IGFBPL1Q8WX77 278 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 ROBO4Q8WZ75 1007 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 GTPBP3Q969Y2 492 aaKnown RBP8.85□□□□□ -0.99
CPSF4-213ENST00000484112 TRMT61AQ96FX7 289 aaKnown RBP8.85□□□□□ -0.99
CPSF4-213ENST00000484112 MPP4Q96JB8 637 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 TMEM43Q9BTV4 400 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 HDHD5Q9BXW7 423 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 RSPO3Q9BXY4 272 aaPredicted RBP8.85□□□□□ -0.99
CPSF4-213ENST00000484112 REG4Q9BYZ8 158 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 SLC19A3Q9BZV2 496 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 ACTR6Q9GZN1 396 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 PARPBPQ9NWS1 579 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 ADPRHL2Q9NX46 363 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 CMTM6Q9NX76 183 aa8.85□□□□□ -0.99
CPSF4-213ENST00000484112 CHD3Q12873 2000 aaKnown RBP8.85□□□□□ -0.99
CPSF4-213ENST00000484112 RAI1Q7Z5J4 1906 aaPredicted RBP8.84□□□□□ -0.99
CPSF4-213ENST00000484112 A0A1B0GWA3 101 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 HTR3EA5X5Y0 456 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 CLOCKO15516 846 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 FRS3O43559 492 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 CHP2O43745 196 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 IGF2P01344 180 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 THRBP10828 461 aa8.84□□□□□ -0.99
CPSF4-213ENST00000484112 IMPDH2P12268 514 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms