RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 IL20Q9NYY1 176 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 H2AFY2Q9P0M6 372 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 TNFRSF10DQ9UBN6 386 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 TEKT2Q9UIF3 430 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 CDH10Q9Y6N8 788 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 FREM3P0C091 2139 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF407Q9C0G0 2248 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 CSMD1Q96PZ7 3565 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 A0A1B0GWA3 101 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 C17orf51A8MQB3 221 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 FAM166BA8MTA8 275 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 EFCAB9A8MZ26 197 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 NPIPA5E9PKD4 350 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 H3BMQ9 156 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 KPNA4O00629 521 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TO15178 435 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF264O43296 627 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 NME2P1O60361 137 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 HCN1O60741 890 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ENTPD6O75354 484 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 PPM1BO75688 479 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 INMTO95050 263 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 UTS2O95399 124 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 NADKO95544 446 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 THY1P04216 161 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 RPLP1P05386 114 aaKnown RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SP1P08047 785 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 IGFBP1P08833 259 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 CCL3P10147 92 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 PNMTP11086 282 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TBXA2RP21731 343 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 NME2P22392 152 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 DNASE1L1P49184 302 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 CYB561P49447 251 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 RNF144AP50876 292 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SSR4P51571 173 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 CCR4P51679 360 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 PNLIPRP2P54317 469 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 CTBP2P56545 445 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 DYNC1I2Q13409 638 aaKnown RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 LSAMPQ13449 338 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 C1DQ13901 141 aaKnown RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 EFR3AQ14156 821 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 XP32Q5T750 250 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SYT6Q5T7P8 510 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 UBE2UQ5VVX9 321 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 BICRALQ6AI39 1079 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 GTF2IRD2BQ6EKJ0 949 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 WBP2NLQ6ICG8 309 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SLC25A25Q6KCM7 469 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 GFRALQ6UXV0 394 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 HSDL2Q6YN16 418 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF620Q6ZNG0 422 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TMPRSS11FQ6ZWK6 438 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF367Q7RTV3 350 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 GTF2IRD2Q86UP8 949 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 FJX1Q86VR8 437 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ANKRD13BQ86YJ7 626 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SULF2Q8IWU5 870 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TMEM156Q8N614 296 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 IQCF1Q8N6M8 205 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 OR5L2Q8NGL0 311 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 OR4C3Q8NH37 302 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF563Q8TA94 476 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TMEM163Q8TC26 289 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 FANK1Q8TC84 345 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SGCDQ92629 289 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ADIPOR1Q96A54 375 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TP53INP1Q96A56 240 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TMEM80Q96HE8 168 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 LRR1Q96L50 414 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 C5orf34Q96MH7 638 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 COG8Q96MW5 612 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ADOQ96SZ5 270 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 DOK1Q99704 481 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 PRSS27Q9BQR3 290 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TBL1XR1Q9BZK7 514 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 NDEL1Q9GZM8 345 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 WWTR1Q9GZV5 400 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 DSN1Q9H410 356 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 EGLN3Q9H6Z9 239 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 FKBP14Q9NWM8 211 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 DNAJC27Q9NZQ0 273 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ABI3Q9P2A4 366 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 MYOTQ9UBF9 498 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 TINAGQ9UJW2 476 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 NPIPA1Q9UND3 350 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 PPIEQ9UNP9 301 aaKnown RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 BAIAP2Q9UQB8 552 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ERGIC3Q9Y282 383 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 HRH3Q9Y5N1 445 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 LIPGQ9Y5X9 500 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 SPTBN1Q01082 2364 aaKnown RBP6.28□□□□□ -1.4
BRCA1-216ENST00000484087 MYO7BQ6PIF6 2116 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 CSMD2Q7Z408 3487 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 KIAA1549Q9HCM3 1950 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 A0A1W2PQD3 144 aa6.28□□□□□ -1.4
BRCA1-216ENST00000484087 ELOA3DA6NLF2 546 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms