RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CREB3L2Q70SY1 520 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF572Q7Z3I7 529 aaPredicted RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 LRP11Q86VZ4 500 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 EPHX4Q8IUS5 362 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 DDIASQ8IXT1 998 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 CLECL1Q8IZS7 167 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 RIBC1Q8N443 379 aaPredicted RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 BPIFB2Q8N4F0 458 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 ARFGAP2Q8N6H7 521 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 MZB1Q8WU39 189 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 RDH5Q92781 318 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 TAF15Q92804 592 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 PMM1Q92871 262 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF837Q96EG3 531 aaPredicted RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF317Q96PQ6 595 aaPredicted RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 DUX5Q96PT3 197 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 SYT3Q9BQG1 590 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 C1orf50Q9BV19 199 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 OR51I1Q9H343 314 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 CRLF2Q9HC73 371 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 EXOSC3Q9NQT5 275 aaKnown RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 DDX28Q9NUL7 540 aaKnown RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 OXSMQ9NWU1 459 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 MYEF2Q9P2K5 600 aaKnown RBP9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 DCDC2Q9UHG0 476 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 PYCARDQ9ULZ3 195 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 WDR45Q9Y484 360 aa9.33□□□□□ -0.92
SMARCC1-205ENST00000483847 A0A1W2PPM1 405 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 PRAMEF27A3QJZ7 478 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 DUXAA6NLW8 204 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 TMEM114B3SHH9 223 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 PIP5K1BO14986 540 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 SEC14L2O76054 403 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 MPZL1O95297 269 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 FSHBP01225 129 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 OR12D1P0DN82 309 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 NR4A1P22736 598 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 RPL3P39023 403 aaKnown RBP9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 TMEM33P57088 247 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 NAA20P61599 178 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 ETF1P62495 437 aaKnown RBP9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 MYBPC1Q00872 1141 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 FAM153CQ494X1 144 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 AVPI1Q5T686 147 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 HIST2H2BDQ6DRA6 164 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 TMEM225Q6GV28 225 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 MDP1Q86V88 176 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 RIMKLAQ8IXN7 391 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 TEX29Q8N6K0 151 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 ACMSDQ8TDX5 336 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 ROPN1LQ96C74 230 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 SLC35G5Q96KT7 338 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 FMO2Q99518 471 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 UNKLQ9H9P5 680 aaKnown RBP9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 ATAD3AQ9NVI7 634 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 ADPRHL2Q9NX46 363 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 FZR1Q9UM11 496 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 CORINQ9Y5Q5 1042 aa9.32□□□□□ -0.92
SMARCC1-205ENST00000483847 A0A0G2JMP0 313 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 A0A0X1KG70 313 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 RNF103-CHMP3A0A140T963 221 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 PLIN3O60664 434 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 SCN2BO60939 215 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 PEX11AO75192 247 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 DEAF1O75398 565 aaPredicted RBP9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 PRSS23O95084 383 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 C1QCP02747 245 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 GSNP06396 782 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 GPIP06744 558 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 NAT2P11245 290 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 HOXB1P14653 301 aaPredicted RBP9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 ARR3P36575 388 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 EVX1P49640 407 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 SH3BGRP55822 239 aaPredicted RBP9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 MVKQ03426 396 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 ZP4Q12836 540 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 BNIP2Q12982 314 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 UGT3A2Q3SY77 523 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF311Q5JNZ3 666 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 ACSM5Q6NUN0 579 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 TNFAIP8L2Q6P589 184 aaPredicted RBP9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 KDM8Q8N371 416 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 SIGLECL1Q8N7X8 197 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 OR4M2Q8NGB6 313 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 NANPQ8TBE9 248 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 TWIST2Q8WVJ9 160 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 XAGE5Q8WWM1 108 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 IFT81Q8WYA0 676 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 DVL3Q92997 716 aaPredicted RBP9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 C1orf147Q96MC9 270 aaPredicted RBP9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 DUSP26Q9BV47 211 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 LINC00470Q9BZP3 86 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 MS4A5Q9H3V2 200 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 PIF1Q9H611 641 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF665Q9H7R5 613 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 MOV10Q9HCE1 1003 aaKnown RBP9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 SLC52A3Q9NQ40 469 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 EXD2Q9NVH0 621 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 ARMCX1Q9P291 453 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms