RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 GOLGA8OA6NCC3 632 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 DUXAA6NLW8 204 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 CCT8L1PA6NM43 557 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 C9JVG2 144 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 NPIPA7E9PJI5 369 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 GOLGA8NF8WBI6 632 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 LSM1O15116 133 aaKnown RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 SCAMP2O15127 329 aaKnown RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 SMAD9O15198 467 aaKnown RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 GPRIN2O60269 458 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 EIF4E2O60573 245 aaKnown RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 PLIN3O60664 434 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 RAD51DO75771 328 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 PGM3O95394 542 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 LINC00032P0C843 101 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 NPIPA8P0DM63 369 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 BCKDHAP12694 445 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 CPA3P15088 417 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 COX5AP20674 150 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 EFNA1P20827 205 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 PTNP21246 168 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 IGHV1-2P23083 117 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 CCT3P49368 545 aaKnown RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 FABP6P51161 128 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 IRX1P78414 480 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 LOXL1Q08397 574 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 TP53BP2Q13625 1128 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 QPRTQ15274 297 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 TOMM34Q15785 309 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 NDUFAF6Q330K2 333 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 LSM12Q3MHD2 195 aaKnown RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 GALNTL6Q49A17 601 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 TIGD2Q4W5G0 525 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 RFTN2Q52LD8 501 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 SLC25A53Q5H9E4 307 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 LIPMQ5VYY2 423 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 FBXW9Q5XUX1 488 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 CYB5R2Q6BCY4 276 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 ZNF544Q6NX49 715 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 Q6ZSR9 355 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 TMPPEQ6ZT21 453 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 DDIASQ8IXT1 998 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 IFT20Q8IY31 132 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 MUC15Q8N387 334 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 NOA1Q8NC60 698 aaKnown RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 OR2T11Q8NH01 316 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 OR52N5Q8NH56 324 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 GPR119Q8TDV5 335 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 SLC25A43Q8WUT9 341 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 TMEM234Q8WY98 164 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 OR5P2Q8WZ92 322 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 ST8SIA1Q92185 356 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 PROX1Q92786 737 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 APH1AQ96BI3 265 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 MOAP1Q96BY2 351 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 C16orf45Q96MC5 204 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 ZNF300Q96RE9 604 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 PRPF18Q99633 342 aaKnown RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 SHARPINQ9H0F6 387 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 SMURF2Q9HAU4 748 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 SIRT3Q9NTG7 399 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 TAS2R16Q9NYV7 291 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 BAIAP2L1Q9UHR4 511 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 ATP6V1HQ9UI12 483 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 EMCNQ9ULC0 261 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 LRCH1Q9Y2L9 728 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 NOSIPQ9Y314 301 aaKnown RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 PTGDR2Q9Y5Y4 395 aa5.16□□□□□ -1.58
CSDE1-207ENST00000483407 SPIN1Q9Y657 262 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.16□□□□□ -1.588e-9■□□□□ 10.5
CSDE1-207ENST00000483407 SONP18583 2426 aaKnown RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 CHD3Q12873 2000 aaKnown RBP5.16□□□□□ -1.58
CSDE1-207ENST00000483407 IGKV3D-15A0A087WSY6 115 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 A0A096LNT2 108 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 A0A1W2PPM1 405 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 SERINC4A6NH21 518 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 B5MCH6 92 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 E7EQL1 145 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 NPIPB9F8W1W9 429 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 H7C417 338 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 M0R1B8 84 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 SULT2B1O00204 365 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 COPEO14579 308 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 GPR171O14626 319 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 ANKRD28O15084 1053 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 CFLARO15519 480 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 LMX1BO60663 402 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 MRPL33O75394 65 aaKnown RBP5.15□□□□□ -1.59
CSDE1-207ENST00000483407 STX11O75558 287 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 LYPLA1O75608 230 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-207ENST00000483407 H6PDO95479 791 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 ABHD16AO95870 558 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 AK1P00568 194 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 UBTFL6P0CB48 400 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-207ENST00000483407 TFPIP10646 304 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 SRD5A1P18405 259 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 PGCP20142 388 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 HNF1AP20823 631 aa5.15□□□□□ -1.59
CSDE1-207ENST00000483407 USF1P22415 310 aaPredicted RBP5.15□□□□□ -1.59
CSDE1-207ENST00000483407 FKBP2P26885 142 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms