RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 C1orf140Q5VVS0 124 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 REEP3Q6NUK4 255 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 Q71RC1 249 aaPredicted RBP8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 AAED1Q7RTV5 226 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 UBE2J2Q8N2K1 259 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 DPP10Q8N608 796 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 POMGNT2Q8NAT1 580 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 ANKK1Q8NFD2 765 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 OR52N5Q8NH56 324 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 TSPEARQ8WU66 669 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 TRMT61AQ96FX7 289 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 ZNF317Q96PQ6 595 aaPredicted RBP8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 DHRS9Q9BPW9 319 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 SIKE1Q9BRV8 207 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 SLCO5A1Q9H2Y9 848 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 HEATR1Q9H583 2144 aaKnown RBP8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 IKZF5Q9H5V7 419 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 CCDC167Q9P0B6 97 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 RASD1Q9Y272 281 aa8.52□□□□□ -1.05
TMEM39A-207ENST00000482162 IGKV1D-42A0A075B6H8 117 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 GMNCA6NCL1 334 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 TMEM247A6NEH6 219 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 OR6C65A6NJZ3 312 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 CCT8L1PA6NM43 557 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 RPL36A-HNRNPH2H7BZ11 118 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 TPST1O60507 370 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 TPST2O60704 377 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 IGHV4-39P01824 125 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 TROVE2P10155 538 aaKnown RBP eCLIP8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 PAX7P23759 505 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 HTR2AP28223 471 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 TTKP33981 857 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 PCBP3P57721 371 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 STX1BP61266 288 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 SLC25A3Q00325 362 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 CDK6Q00534 326 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 SQLEQ14534 574 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 CLEC12BQ2HXU8 276 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 RUNDC3AQ59EK9 446 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 GCNT6Q5T4J0 391 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 TMEM225Q6GV28 225 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 KLHL17Q6TDP4 642 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 C5orf46Q6UWT4 87 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 CASP12Q6UXS9 341 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 B3GLCTQ6Y288 498 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 LINGO2Q7L985 606 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 NET1Q7Z628 596 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 CPLX4Q7Z7G2 160 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 CADM2Q8N3J6 435 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 FAM169BQ8N8A8 192 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 OR6S1Q8NH40 331 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 MAGEE2Q8TD90 523 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 BCL2L2Q92843 193 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 GTPBP3Q969Y2 492 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 KTI12Q96EK9 354 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 SLC41A3Q96GZ6 507 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 CPPED1Q9BRF8 314 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 LINC00470Q9BZP3 86 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 OBP2BQ9NPH6 170 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 FAIMQ9NVQ4 179 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 B3GAT1Q9P2W7 334 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 B3GALT5Q9Y2C3 310 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 AMDHD2Q9Y303 409 aa8.51□□□□□ -1.05
TMEM39A-207ENST00000482162 A0A087WUJ7 227 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 A0A096LNT2 108 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 ARPC4-TTLL3A0A0A6YYG9 625 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 A0A1B0GWA3 101 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 OR2T1O43869 369 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 EDF1O60869 148 aaKnown RBP8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 NDUFS7O75251 213 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 MFN2O95140 757 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 PNMTP11086 282 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 HOXB1P14653 301 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 ZNF83P51522 516 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 PRPS1P60891 318 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 HOXC5Q00444 222 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 SPOCK1Q08629 439 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 C3orf36Q3SXR2 165 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 GLIPR1L2Q4G1C9 344 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 AGKQ53H12 422 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 ARFGEF3Q5TH69 2177 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 AGAP6Q5VW22 663 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 METTL21CQ5VZV1 264 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 FAM91A1Q658Y4 838 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 ZNF544Q6NX49 715 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 LINC00114Q6XXX2 140 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 RETREG3Q86VR2 466 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 PTOV1Q86YD1 416 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 OR10H5Q8NGA6 315 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 NFKBIDQ8NI38 313 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 DNAJA4Q8WW22 397 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 SLC38A4Q969I6 547 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 TAAR8Q969N4 342 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 WFDC6Q9BQY6 131 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 TAPBPLQ9BX59 468 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 NELFAQ9H3P2 528 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 RABEP2Q9H5N1 569 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 EVA1AQ9H8M9 152 aa8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 BARX1Q9HBU1 254 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-207ENST00000482162 CBLN4Q9NTU7 201 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms