RNA–Protein interactions for RNA: ENST00000480187.5

NUP58-211, Transcript of nucleoporin 58, humanhuman

TSL 2

Gene NUP58, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-211ENST00000480187 THUMPD1Q9NXG2 353 aaKnown RBP13.66□□□□□ -0.22
NUP58-211ENST00000480187 RASD1Q9Y272 281 aa13.66□□□□□ -0.22
NUP58-211ENST00000480187 ZNF443Q9Y2A4 671 aaPredicted RBP13.66□□□□□ -0.22
NUP58-211ENST00000480187 TMEM229AB2RXF0 380 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 LMX1BO60663 402 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 PDE5AO76074 875 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 LGI1O95970 557 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 CRYAAP02489 173 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 BCHEP06276 602 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 ETFAP13804 333 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 IDO1P14902 403 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 SERPINF1P36955 418 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 CRATP43155 626 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 NR4A2P43354 598 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 SELENOPP49908 381 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 DSTNP60981 165 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 UBE2NP61088 152 aaKnown RBP13.65□□□□□ -0.22
NUP58-211ENST00000480187 LARS2Q15031 903 aaKnown RBP13.65□□□□□ -0.22
NUP58-211ENST00000480187 PDCD4Q53EL6 469 aaKnown RBP13.65□□□□□ -0.22
NUP58-211ENST00000480187 PRAMEF8Q5VWM4 474 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 PRAMEF7Q5VXH5 474 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 EPHX4Q8IUS5 362 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 STK35Q8TDR2 534 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 SLC38A5Q8WUX1 472 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 C3orf49Q96BT1 292 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 PAIP2Q9BPZ3 127 aaKnown RBP13.65□□□□□ -0.22
NUP58-211ENST00000480187 KCNS3Q9BQ31 491 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 PIMREGQ9BSJ6 248 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 SPATA9Q9BWV2 254 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 LINC00470Q9BZP3 86 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 CENPHQ9H3R5 247 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 ARMC7Q9H6L4 198 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 CA10Q9NS85 328 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 THAP1Q9NVV9 213 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 CRNNQ9UBG3 495 aaPredicted RBP13.65□□□□□ -0.22
NUP58-211ENST00000480187 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
NUP58-211ENST00000480187 A0A0G2JPF8 293 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 LOC390937A0A1W2PQ73 354 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 HNRNPCL2B2RXH8 293 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 HNRNPCL3B7ZW38 293 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 B9A039 149 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 SLCO1B7G3V0H7 640 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 HNRNPCL1O60812 293 aaKnown RBP13.64□□□□□ -0.23
NUP58-211ENST00000480187 SNNO75324 88 aaPredicted RBP13.64□□□□□ -0.23
NUP58-211ENST00000480187 SLC22A3O75751 556 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 ANP32DO95626 131 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 HNRNPCL4P0DMR1 293 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 PRG2P13727 222 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 HOXB1P14653 301 aaPredicted RBP13.64□□□□□ -0.23
NUP58-211ENST00000480187 NCF2P19878 526 aaPredicted RBP13.64□□□□□ -0.23
NUP58-211ENST00000480187 LGALS3BPQ08380 585 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 EFNB3Q15768 340 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 CEP85LQ5SZL2 805 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 HHATQ5VTY9 493 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 NIPAL3Q6P499 406 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 MSANTD1Q6ZTZ1 278 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 CROCCP2Q86T23 111 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 CLIP4Q8N3C7 705 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 FAM169BQ8N8A8 192 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 ANKK1Q8NFD2 765 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 MFSD8Q8NHS3 518 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 BCL2L2Q92843 193 aaPredicted RBP13.64□□□□□ -0.23
NUP58-211ENST00000480187 MAELQ96JY0 434 aaKnown RBP13.64□□□□□ -0.23
NUP58-211ENST00000480187 ALKBH3Q96Q83 286 aaPredicted RBP13.64□□□□□ -0.23
NUP58-211ENST00000480187 RMND5AQ9H871 391 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 TPT1P8Q9HAU6 139 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 CACYBPQ9HB71 228 aaKnown RBP13.64□□□□□ -0.23
NUP58-211ENST00000480187 ZIM2Q9NZV7 527 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 FBXO9Q9UK97 447 aaPredicted RBP13.64□□□□□ -0.23
NUP58-211ENST00000480187 IFT52Q9Y366 437 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 CHST2Q9Y4C5 530 aa13.64□□□□□ -0.23
NUP58-211ENST00000480187 RTTNQ86VV8 2226 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 TMEM247A6NEH6 219 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 FTCDNL1E5RQL4 147 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 UPK3AO75631 287 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 AHSA1O95433 338 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 IGLV1-44P01699 117 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 SH3BGRP55822 239 aaPredicted RBP13.63□□□□□ -0.23
NUP58-211ENST00000480187 NAAAQ02083 359 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 GGTLC2Q14390 218 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 ADIPOQQ15848 244 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 FAM166AQ6J272 317 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 ANKRD16Q6P6B7 361 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 LINGO2Q7L985 606 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 SLC46A3Q7Z3Q1 461 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 SERPINA11Q86U17 422 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 SLC35B4Q969S0 331 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 TMEM19Q96HH6 336 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 ITCHQ96J02 903 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 PRR14Q9BWN1 585 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 PARD6BQ9BYG5 372 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 NELFAQ9H3P2 528 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 PLK3Q9H4B4 646 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.63□□□□□ -0.23
NUP58-211ENST00000480187 KCNS2Q9ULS6 477 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 RCE1Q9Y256 329 aa13.63□□□□□ -0.23
NUP58-211ENST00000480187 V9GYY5 206 aaPredicted RBP13.63□□□□□ -0.23
NUP58-211ENST00000480187 PLCE1Q9P212 2302 aa13.62□□□□□ -0.23
NUP58-211ENST00000480187 RPL36A-HNRNPH2H7BZ11 118 aa13.62□□□□□ -0.23
NUP58-211ENST00000480187 NR5A2O00482 541 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms