RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PRKACGP22612 351 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 GTF2E2P29084 291 aaKnown RBP11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 UQCRC1P31930 480 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 EIF1AXP47813 144 aaKnown RBP11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 DAPP51397 102 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 P2RY4P51582 365 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 ALDH3A2P51648 485 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 MLLT10P55197 1068 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 CARD18P57730 90 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 RBPJQ06330 500 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 FOXD4Q12950 439 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 DAG1Q14118 895 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 EMC4Q5J8M3 183 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 PPP4R4Q6NUP7 873 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 RPL13AP3Q6NVV1 102 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 ZNF620Q6ZNG0 422 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 RASSF6Q6ZTQ3 369 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 NANOGNBQ7Z5D8 188 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 CBR4Q8N4T8 237 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 ATG16L2Q8NAA4 619 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 ZNF417Q8TAU3 575 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 OSTF1Q92882 214 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 ZNF587Q96SQ5 575 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 NIPSNAP1Q9BPW8 284 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 TUBA1CQ9BQE3 449 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 ZNF556Q9HAH1 456 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 CHST11Q9NPF2 352 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 KIF17Q9P2E2 1029 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 CLCF1Q9UBD9 225 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 TNFRSF10DQ9UBN6 386 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 ENOPH1Q9UHY7 261 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 TMEFF2Q9UIK5 374 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 MCTS1Q9ULC4 181 aaKnown RBP11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 CAMK2AQ9UQM7 478 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 POFUT2Q9Y2G5 429 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 PHF3Q92576 2039 aaKnown RBP11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 DOCK7Q96N67 2140 aa11.23□□□□□ -0.61
TRAPPC12-218ENST00000479897 LOC102725191A0A1B0GVB3 256 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 UNC119BA6NIH7 251 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 NPIPB13A6NJU9 1138 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 NPIPB4C9JG80 1138 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 PDLIM1O00151 329 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 SOCS2O14508 198 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 SMAD9O15198 467 aaKnown RBP11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 KALRNO60229 2985 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 PTP4A3O75365 173 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 VAMP5O95183 116 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 TP53P04637 393 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 ABOP16442 354 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 ZNF26P17031 533 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 ENPP1P22413 925 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 SLC16A1P53985 500 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 OR2B6P58173 313 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 FXYD6P3P58550 94 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 PRPS1P60891 318 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 SRYQ05066 204 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 ZP4Q12836 540 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 PDK3Q15120 406 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 POU4F3Q15319 338 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 C3AR1Q16581 482 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 RFX4Q33E94 735 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 ZBED5Q49AG3 693 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 GXYLT1Q4G148 440 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 ACSF3Q4G176 576 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 OTUD3Q5T2D3 398 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 KLHL17Q6TDP4 642 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 ZBTB49Q6ZSB9 765 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 H1FNTQ75WM6 255 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 OAFQ86UD1 273 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 CD163Q86VB7 1156 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 C10orf53Q8N6V4 93 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 LRRC17Q8N6Y2 441 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 OR13C2Q8NGS9 318 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 FANK1Q8TC84 345 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 RNF128Q8TEB7 428 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 SLC25A36Q96CQ1 311 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 ZNF845Q96IR2 970 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 RDH12Q96NR8 316 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 GPX7Q96SL4 187 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 NAA11Q9BSU3 229 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 SF3B5Q9BWJ5 86 aaKnown RBP11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 UCK2Q9BZX2 261 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 PAPOLBQ9NRJ5 636 aaKnown RBP11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 PNPLA3Q9NST1 481 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 IL20Q9NYY1 176 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 REV1Q9UBZ9 1251 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 CDH10Q9Y6N8 788 aa11.22□□□□□ -0.61
TRAPPC12-218ENST00000479897 CFAP46Q8IYW2 2715 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 CD8B2A6NJW9 211 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 CLCA1A8K7I4 914 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 ZNF814B7Z6K7 855 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 PLPP3O14495 311 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 CYTIPO60759 359 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 SLC19A2O60779 497 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 SYNGR4O95473 234 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 TPOP07202 933 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 IGFBP5P24593 272 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 PUDPQ08623 228 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 PON3Q15166 354 aa11.21□□□□□ -0.61
TRAPPC12-218ENST00000479897 TAF11Q15544 211 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms