RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	ZNF83	P51522	516 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	CDH11	P55287	796 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	ATP5J2	P56134	94 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	PCBP3	P57721	371 aa	Known RBP	13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	MTPN	P58546	118 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	DMTN	Q08495	405 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	OR7E24	Q6IFN5	339 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	CLEC9A	Q6UXN8	241 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	LINGO2	Q7L985	606 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	C17orf78	Q8N4C9	275 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	ANKRD27	Q96NW4	1050 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	SPATA5L1	Q9BVQ7	753 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	SLCO5A1	Q9H2Y9	848 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	SLC17A5	Q9NRA2	495 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	CISD1	Q9NZ45	108 aa	Known RBP	13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	B3GAT1	Q9P2W7	334 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	UPB1	Q9UBR1	384 aa		13.18	□□□□□ -0.3
CCNL1-222	ENST00000479596	FN1	P02751	2386 aa	Known RBP	13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596		A0A0G2JND7	137 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	EVPLL	A8MZ36	301 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	MFN2	O95140	757 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	VAMP5	O95183	116 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	LY6G6D	O95868	133 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	HEXA	P06865	529 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	SLC6A2	P23975	617 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	PTAFR	P25105	342 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	MPG	P29372	298 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	LTB	Q06643	244 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	KRTAP21-3	Q3LHN1	58 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	ELOA3B	Q3SY89	546 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	TMEM225	Q6GV28	225 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	TMEM108	Q6UXF1	575 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	B3GLCT	Q6Y288	498 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	DTX2	Q86UW9	622 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	KRT73	Q86Y46	540 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	KDM8	Q8N371	416 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	POMGNT2	Q8NAT1	580 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	HIPK4	Q8NE63	616 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	ELOA3	Q8NG57	546 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	TAAR8	Q969N4	342 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	SLC25A36	Q96CQ1	311 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	BOD1	Q96IK1	185 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	CGREF1	Q99674	301 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	SIKE1	Q9BRV8	207 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	BDH2	Q9BUT1	245 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	C1QTNF6	Q9BXI9	259 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	TES	Q9UGI8	421 aa	Known RBP	13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	TRIM33	Q9UPN9	1127 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	RASD1	Q9Y272	281 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	NDUFAF1	Q9Y375	327 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	TLN2	Q9Y4G6	2542 aa		13.17	□□□□□ -0.3
CCNL1-222	ENST00000479596	PLCE1	Q9P212	2302 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596		A0A0B4J2E0	115 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596		A0A1B0GX12	115 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	PRORSD1P	A6NEY8	169 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596		E7EQL1	145 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596		M0R1B8	84 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	FBP2	O00757	339 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	SMAD7	O15105	426 aa	Known RBP	13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	UPK3A	O75631	287 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	PTN	P21246	168 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	HIKESHI	Q53FT3	197 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	ALG10B	Q5I7T1	473 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	CGB2	Q6NT52	195 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	NET1	Q7Z628	596 aa	Predicted RBP	13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	ARMC8	Q8IUR7	673 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	TSPEAR	Q8WU66	669 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	DNAJA4	Q8WW22	397 aa	Predicted RBP	13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	ZNF607	Q96SK3	696 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	TMEM120A	Q9BXJ8	343 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	KAT8	Q9H7Z6	458 aa	Known RBP	13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	ZNF446	Q9NWS9	450 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	KLHL14	Q9P2G3	628 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	RPS6KB2	Q9UBS0	482 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	AMDHD2	Q9Y303	409 aa		13.16	□□□□□ -0.3
CCNL1-222	ENST00000479596	DNHD1	Q96M86	4753 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596		M0R082	166 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	ANGPT2	O15123	496 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	NDUFS7	O75251	213 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	ZNF432	O94892	652 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	IGHV4-39	P01824	125 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	OPN1SW	P03999	348 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	GZMM	P51124	257 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	RGS8	P57771	180 aa	Predicted RBP	13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	TGFBR3	Q03167	851 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	OR1Q1	Q15612	314 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	NPTX1	Q15818	432 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	FAM69A	Q5T7M9	428 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	METTL21C	Q5VZV1	264 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	FAM91A1	Q658Y4	838 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	C11orf71	Q6IPW1	123 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	NIPAL3	Q6P499	406 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	ULK3	Q6PHR2	472 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	KLHL17	Q6TDP4	642 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	C5orf46	Q6UWT4	87 aa		13.15	□□□□□ -0.3
CCNL1-222	ENST00000479596	SMYD1	Q8NB12	490 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms