RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 RPAP1Q9BWH6 1393 aaPredicted RBP3.44□□□□□ -1.86
CCDC58-204ENST00000479414 A0A1B0GUA9 196 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 GJE1A6NN92 205 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 CPLX1O14810 134 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 ZNF208O43345 1280 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 UGT1A9O60656 530 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 CA11O75493 328 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 IL1BP01584 269 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 MAGEA8P43361 318 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 KIR2DS4P43632 304 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 KPNA2P52292 529 aaKnown RBP3.44□□□□□ -1.86
CCDC58-204ENST00000479414 TAS2R19P59542 299 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 ACTR1AP61163 376 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 CDK16Q00536 496 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 REG3AQ06141 175 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 GPNMBQ14956 572 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 OXA1LQ15070 435 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 PARP15Q460N3 678 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 Q6P435 159 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 Q6ZPB1 254 aaPredicted RBP3.44□□□□□ -1.86
CCDC58-204ENST00000479414 ENTHD1Q8IYW4 607 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 Q8N9L7 120 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 SCFD1Q8WVM8 642 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 MAIP1Q8WWC4 291 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 UFD1Q92890 307 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 FAM104AQ969W3 186 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 SLC41A3Q96GZ6 507 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 SEC22AQ96IW7 307 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 P2RY13Q9BPV8 354 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 RAB34Q9BZG1 259 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 SLC25A22Q9H936 323 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 CDH9Q9ULB4 789 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 COPS3Q9UNS2 423 aa3.44□□□□□ -1.86
CCDC58-204ENST00000479414 C15orf38-AP3S2A0A0A6YYH1 394 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 POLR2DO15514 142 aaKnown RBP3.43□□□□□ -1.86
CCDC58-204ENST00000479414 RHOBTB1O94844 696 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 KLF8O95600 359 aaPredicted RBP3.43□□□□□ -1.86
CCDC58-204ENST00000479414 IGHV4-34P06331 123 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 CCR1P32246 355 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 RFC4P35249 363 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 FGL1Q08830 312 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 PDK3Q15120 406 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 DPYSL2Q16555 572 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 NRF1Q16656 503 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 EXOC3L2Q2M3D2 409 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 Q6ZN92 141 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 ZNF620Q6ZNG0 422 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 RGS9BPQ6ZS82 235 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 TRIM69Q86WT6 500 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 CCDC50Q8IVM0 306 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 OR6C4Q8NGE1 309 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 SRSF12Q8WXF0 261 aaKnown RBP3.43□□□□□ -1.86
CCDC58-204ENST00000479414 UCN3Q969E3 161 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 ITCHQ96J02 903 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 FCRL1Q96LA6 429 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 PARD6BQ9BYG5 372 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 MYOZ2Q9NPC6 264 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 CCL28Q9NRJ3 127 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 QPCTLQ9NXS2 382 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 CLCF1Q9UBD9 225 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 ZNF225Q9UK10 706 aa3.43□□□□□ -1.86
CCDC58-204ENST00000479414 IGLV3-22A0A075B6J6 115 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 LOC110117498-PIK3R3F6TDL0 507 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 FOXE1O00358 373 aaPredicted RBP3.42□□□□□ -1.86
CCDC58-204ENST00000479414 MED7O43513 233 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 CCDC130P13994 396 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 GPM6AP51674 278 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 CRYBB1P53674 252 aaPredicted RBP3.42□□□□□ -1.86
CCDC58-204ENST00000479414 AIF1P55008 147 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 DLX1P56177 255 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 MICBQ29980 383 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 SAMD4BQ5PRF9 694 aaKnown RBP3.42□□□□□ -1.86
CCDC58-204ENST00000479414 CASC1Q6TDU7 716 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 GDPD3Q7L5L3 318 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 ECHDC2Q86YB7 292 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 ZNF679Q8IYX0 411 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 ZCCHC7Q8N3Z6 543 aaKnown RBP3.42□□□□□ -1.86
CCDC58-204ENST00000479414 FAM71E2Q8N5Q1 922 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 ARL6IP6Q8N6S5 226 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 MAGEE2Q8TD90 523 aaPredicted RBP3.42□□□□□ -1.86
CCDC58-204ENST00000479414 C10orf35Q96D05 121 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 RBM14Q96PK6 669 aaKnown RBP3.42□□□□□ -1.86
CCDC58-204ENST00000479414 SLC25A39Q9BZJ4 359 aaPredicted RBP3.42□□□□□ -1.86
CCDC58-204ENST00000479414 NHEJ1Q9H9Q4 299 aaPredicted RBP3.42□□□□□ -1.86
CCDC58-204ENST00000479414 KCNIP3Q9Y2W7 256 aa3.42□□□□□ -1.86
CCDC58-204ENST00000479414 IQANK1A0A1B0GTG1 560 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 A8MXQ7 604 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 AGPAT2O15120 278 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 SURF6O75683 361 aaKnown RBP3.41□□□□□ -1.86
CCDC58-204ENST00000479414 GAPDHP04406 335 aaKnown RBP3.41□□□□□ -1.86
CCDC58-204ENST00000479414 KLK3P07288 261 aaPredicted RBP3.41□□□□□ -1.86
CCDC58-204ENST00000479414 HSMCR30P0CW71 290 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 ICAM2P13598 275 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 PRDX3P30048 256 aaKnown RBP3.41□□□□□ -1.86
CCDC58-204ENST00000479414 OPRD1P41143 372 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 ACVR1Q04771 509 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 MAJINQ3KP22 176 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 GPR157Q5UAW9 335 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 CENPPQ6IPU0 288 aa3.41□□□□□ -1.86
CCDC58-204ENST00000479414 ENPP6Q6UWR7 440 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms