RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 MT-ND3P03897 115 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 P4HA1P13674 534 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 CALRP27797 417 aaKnown RBP3.82□□□□□ -1.8
CCDC171-207ENST00000478913 TRA2BP62995 288 aaKnown RBP3.82□□□□□ -1.8
CCDC171-207ENST00000478913 CCZ1BP86790 482 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 CCZ1P86791 482 aaPredicted RBP3.82□□□□□ -1.8
CCDC171-207ENST00000478913 UBXN1Q04323 297 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 PEX6Q13608 980 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 KLF5Q13887 457 aaPredicted RBP3.82□□□□□ -1.8
CCDC171-207ENST00000478913 CRMP1Q14194 572 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 GPAT3Q53EU6 434 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 DEFB121Q5J5C9 76 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 ZFAND6Q6FIF0 208 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 ALKAL1Q6UXT8 129 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 ASRGL1Q7L266 308 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 HORMAD1Q86X24 394 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 CNTN4Q8IWV2 1026 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 LINC00518Q8N0U6 118 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 SPAG16Q8N0X2 631 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 ZNF713Q8N859 430 aaPredicted RBP3.82□□□□□ -1.8
CCDC171-207ENST00000478913 RHOXF1Q8NHV9 184 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 FLVCR1-AS1Q8TAF5 88 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 LINC01560Q8TB33 94 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 ZNF560Q96MR9 790 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 NAP1L3Q99457 506 aaPredicted RBP3.82□□□□□ -1.8
CCDC171-207ENST00000478913 ACAT2Q9BWD1 397 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 Q9HAA7 133 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 EML4Q9HC35 981 aaKnown RBP3.82□□□□□ -1.8
CCDC171-207ENST00000478913 ABCC13Q9NSE7 274 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 CLEC5AQ9NY25 188 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 TDRKHQ9Y2W6 561 aaKnown RBP3.82□□□□□ -1.8
CCDC171-207ENST00000478913 ATG4BQ9Y4P1 393 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 PLCE1Q9P212 2302 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 PRR14LQ5THK1 2151 aa3.82□□□□□ -1.8
CCDC171-207ENST00000478913 FAT4Q6V0I7 4981 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 ZNF487B1APH4 448 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 NPIPA5E9PKD4 350 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 SH2D1BO14796 132 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 ZW10O43264 779 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 KERAO60938 352 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 HSF2BPO75031 334 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 PITPNBP48739 271 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 RPS4XP62701 263 aaKnown RBP3.81□□□□□ -1.8
CCDC171-207ENST00000478913 PPP1R8Q12972 351 aaKnown RBP3.81□□□□□ -1.8
CCDC171-207ENST00000478913 MXD4Q14582 209 aaPredicted RBP3.81□□□□□ -1.8
CCDC171-207ENST00000478913 CLPPQ16740 277 aaPredicted RBP3.81□□□□□ -1.8
CCDC171-207ENST00000478913 HFEQ30201 348 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 CNPY1Q3B7I2 92 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 ANKRD55Q3KP44 614 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 RNLSQ5VYX0 342 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 HIST2H2AA3Q6FI13 130 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 TAF8Q7Z7C8 310 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 RPRMLQ8N4K4 120 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 ZNF491Q8N8L2 437 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 DCAF4L2Q8NA75 395 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 OR6T1Q8NGN1 323 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 TYMSOSQ8TAI1 123 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 SLCO4A1Q96BD0 722 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 DTD2Q96FN9 168 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 GPR137Q96N19 417 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 APOL2Q9BQE5 337 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 DCTPP1Q9H773 170 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 KCNMB3Q9NPA1 279 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 CGNQ9P2M7 1197 aaKnown RBP3.81□□□□□ -1.8
CCDC171-207ENST00000478913 LSM7Q9UK45 103 aaKnown RBP3.81□□□□□ -1.8
CCDC171-207ENST00000478913 IKZF3Q9UKT9 509 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 NPIPA1Q9UND3 350 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 SLC6A5Q9Y345 797 aa3.81□□□□□ -1.8
CCDC171-207ENST00000478913 SRRM2Q9UQ35 2752 aaKnown RBP3.8□□□□□ -1.8
CCDC171-207ENST00000478913 CITO14578 2027 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 MYH9P35579 1960 aaKnown RBP3.8□□□□□ -1.8
CCDC171-207ENST00000478913 TUBAL3A6NHL2 446 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 CCDC69A6NI79 296 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 LRRIQ4A6NIV6 560 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 K7ERI5 159 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 VEGFDO43915 354 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 HMMRO75330 724 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 KBTBD11O94819 623 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 F10P00742 488 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 ABHD2P08910 425 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 KCNE1P15382 129 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 HLA-DPA1P20036 260 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 NDST1P52848 882 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 ARG2P78540 354 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 GABPB1Q06547 395 aaPredicted RBP3.8□□□□□ -1.8
CCDC171-207ENST00000478913 ABRAXAS2Q15018 415 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 HAGHQ16775 308 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 KRT71Q3SY84 523 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 XKR4Q5GH76 650 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 PRAMEF7Q5VXH5 474 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 ETFRF1Q6IPR1 90 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 RHBDD2Q6NTF9 364 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 IGFL2Q6UWQ7 119 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 Q6ZR54 194 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 ADCK1Q86TW2 530 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 PEX5LQ8IYB4 626 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 LINC00612Q8N6U2 182 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 DDI1Q8WTU0 396 aa3.8□□□□□ -1.8
CCDC171-207ENST00000478913 API5Q9BZZ5 524 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms