RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 MVDP53602 400 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 MAGOHP61326 146 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 NCALDP61601 193 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 IRX1P78414 480 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 LOXL1Q08397 574 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 ELOA3BQ3SY89 546 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 CXXC5Q7LFL8 322 aaKnown RBP12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 WDR31Q8NA23 367 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 ANKK1Q8NFD2 765 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 ELOA3Q8NG57 546 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 MFSD8Q8NHS3 518 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 AURKBQ96GD4 344 aaPredicted RBP12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 KATNB1Q9BVA0 655 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 C1QTNF6Q9BXI9 259 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 C12orf10Q9HB07 376 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 BCL2L10Q9HD36 194 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 A4GALTQ9NPC4 353 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 LPAR3Q9UBY5 353 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 CDC42EP3Q9UKI2 254 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 CORO2BQ9UQ03 480 aa12.65□□□□□ -0.38
SMARCE1-209ENST00000478349 IGHV4-30-2A0A087WSY4 118 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 PRORSD1PA6NEY8 169 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 ATP6V1G2-DDX39BF2Z307 99 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 NDUFS8O00217 210 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 PDE5AO76074 875 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 PNMTP11086 282 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 ETS2P15036 469 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 ZNF43P17038 809 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 PTNP21246 168 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 VLDLRP98155 873 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 MFSD13AQ14CX5 517 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 RGNQ15493 299 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 C3orf36Q3SXR2 165 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC9B1Q4ZJI4 515 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 NIPAL3Q6P499 406 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 ANKRD16Q6P6B7 361 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 B3GLCTQ6Y288 498 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 HIPK1Q86Z02 1210 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 BHLHE22Q8NFJ8 381 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 OR10H5Q8NGA6 315 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 MAGEE2Q8TD90 523 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 PROX1Q92786 737 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC38A4Q969I6 547 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 C3orf49Q96BT1 292 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 ZNF385AQ96PM9 386 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 ALKBH3Q96Q83 286 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC38A2Q96QD8 506 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 TNFRSF13CQ96RJ3 184 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 LINC00470Q9BZP3 86 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 EVA1AQ9H8M9 152 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC13A4Q9UKG4 626 aa12.64□□□□□ -0.39
SMARCE1-209ENST00000478349 ARPC4-TTLL3A0A0A6YYG9 625 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 TMEM229AB2RXF0 380 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 CLIC1O00299 241 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 AIM2O14862 343 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC43A1O75387 559 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 TGDSO95455 350 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 PRKAR1BP31321 381 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 FOXG1P55316 489 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 BNIP2Q12982 314 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 C1DQ13901 141 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 TMEM249Q2WGJ8 235 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 TBRG1Q3YBR2 411 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 HIKESHIQ53FT3 197 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 RPS26P11Q5JNZ5 115 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 FAM69AQ5T7M9 428 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 CREB3L2Q70SY1 520 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC46A3Q7Z3Q1 461 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 NET1Q7Z628 596 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 SERPINA11Q86U17 422 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 SNX32Q86XE0 403 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 CCDC36Q8IYA8 594 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 ZNF525Q8N782 197 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 FAM169BQ8N8A8 192 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 OR4F15Q8NGB8 312 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 OR1K1Q8NGR3 316 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 DNAJA4Q8WW22 397 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 VPS33AQ96AX1 596 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 EPYCQ99645 322 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 PIMREGQ9BSJ6 248 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 TCF7L2Q9NQB0 619 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC6A13Q9NSD5 602 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 ADAM21Q9UKJ8 722 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 MOKQ9UQ07 419 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 USH1CQ9Y6N9 552 aa12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 NUP214P35658 2090 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-209ENST00000478349 ZANQ9Y493 2812 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 NPIPB7O75200 414 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 LGI1O95970 557 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 F12P00748 615 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 C1QCP02747 245 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 BMP2P12643 396 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 MRPL19P49406 292 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 PDLIM4P50479 330 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 SLC25A3Q00325 362 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 IL1RL1Q01638 556 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 MAPK11Q15759 364 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 C6orf52Q5T4I8 152 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 GCNT6Q5T4J0 391 aa12.62□□□□□ -0.39
SMARCE1-209ENST00000478349 C6orf89Q6UWU4 347 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms