RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 HMGA2P52926 109 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 CASP6P55212 293 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 CSNK2A1P68400 391 aaPredicted RBP10.23□□□□□ -0.77
CBWD3-206ENST00000478048 PMPCAQ10713 525 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 ZNF74Q16587 644 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 EXOC3L2Q2M3D2 409 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 C5orf46Q6UWT4 87 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 ZNF730Q6ZMV8 503 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 CCDC103Q8IW40 242 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 C10orf53Q8N6V4 93 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 TMEM99Q8N816 258 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 OR4C15Q8NGM1 316 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 MFSD8Q8NHS3 518 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 ALPK1Q96QP1 1244 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 DMRTA2Q96SC8 542 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 EPYCQ99645 322 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 TAPBPLQ9BX59 468 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 SLC19A3Q9BZV2 496 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 CALHM2Q9HA72 323 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 TIGARQ9NQ88 270 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 ARMC1Q9NVT9 282 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 PAQR5Q9NXK6 330 aaPredicted RBP10.23□□□□□ -0.77
CBWD3-206ENST00000478048 MED31Q9Y3C7 131 aa10.23□□□□□ -0.77
CBWD3-206ENST00000478048 SH3PXD2BA1X283 911 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 E9PLN8 166 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 H3BNX3 289 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 LRRTM2O43300 516 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 OR2T1O43869 369 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 SYNGR4O95473 234 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 HOXD4P09016 255 aaPredicted RBP10.22□□□□□ -0.77
CBWD3-206ENST00000478048 IFI30P13284 250 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 MAKP20794 623 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 GRPRP30550 384 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 P2RY4P51582 365 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 AGFG1P52594 562 aaKnown RBP10.22□□□□□ -0.77
CBWD3-206ENST00000478048 NUP107P57740 925 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 SMIM11AP58511 58 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 SLC35A1P78382 337 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 H3F3AP84243 136 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 MBOAT2Q6ZWT7 520 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 ZNF771Q7L3S4 317 aaPredicted RBP10.22□□□□□ -0.77
CBWD3-206ENST00000478048 FCRLAQ7L513 359 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 SLC46A3Q7Z3Q1 461 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 P4HA3Q7Z4N8 544 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 TMEM179BQ7Z7N9 219 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 GCNT2Q8N0V5 402 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 NAXEQ8NCW5 288 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 OR4K5Q8NGD3 323 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 ABHD3Q8WU67 409 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 LRTOMTQ8WZ04 291 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 VKORC1Q9BQB6 163 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 PRRG4Q9BZD6 226 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 KLHL4Q9C0H6 718 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 REEP1Q9H902 201 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 NTN4Q9HB63 628 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 KLHL13Q9P2N7 655 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 MCTS1Q9ULC4 181 aaKnown RBP10.22□□□□□ -0.77
CBWD3-206ENST00000478048 CLEC4AQ9UMR7 237 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 SAMHD1Q9Y3Z3 626 aaKnown RBP10.22□□□□□ -0.77
CBWD3-206ENST00000478048 SPTBN1Q01082 2364 aaKnown RBP10.22□□□□□ -0.77
CBWD3-206ENST00000478048 USP9XQ93008 2570 aaPredicted RBP10.22□□□□□ -0.77
CBWD3-206ENST00000478048 HELZ2Q9BYK8 2649 aaKnown RBP10.22□□□□□ -0.77
CBWD3-206ENST00000478048 FREM1Q5H8C1 2179 aa10.22□□□□□ -0.77
CBWD3-206ENST00000478048 MBD3L4A6NDZ8 208 aaPredicted RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 MBD3L3A6NE82 208 aaPredicted RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 MBD3L5A6NJ08 208 aaPredicted RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 M0R082 166 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 GNGT2O14610 69 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 CLOCKO15516 846 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 RRP9O43818 475 aaKnown RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 FZD7O75084 574 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 KRT36O76013 467 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 EPXP11678 715 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 HOXB6P17509 224 aaKnown RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 PRKCDQ05655 676 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 SF3B4Q15427 424 aaKnown RBP eCLIP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 OTUD3Q5T2D3 398 aaPredicted RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 HMBOX1Q6NT76 420 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 PAQR6Q6TCH4 344 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 AMIGO2Q86SJ2 522 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 RNF113BQ8IZP6 322 aaKnown RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 KDM8Q8N371 416 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 OR9Q2Q8NGE9 314 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 MBD3L2Q8NHZ7 208 aaPredicted RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 ZNF417Q8TAU3 575 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 RNF128Q8TEB7 428 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 BPIFA2Q96DR5 249 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 SGTBQ96EQ0 304 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 FAM46AQ96IP4 442 aaKnown RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 ZNF587Q96SQ5 575 aaPredicted RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 GPA33Q99795 319 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 YY1AP1Q9H869 796 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 RNF122Q9H9V4 155 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 DNAJB9Q9UBS3 223 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 ING1Q9UK53 422 aaPredicted RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 ZNF175Q9Y473 711 aa10.21□□□□□ -0.77
CBWD3-206ENST00000478048 NCOA6Q14686 2063 aaPredicted RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 UBR5O95071 2799 aaPredicted RBP10.21□□□□□ -0.77
CBWD3-206ENST00000478048 FASNP49327 2511 aaKnown RBP10.21□□□□□ -0.78
CBWD3-206ENST00000478048 CDC42EP2O14613 210 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms