RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 AQP1P29972 269 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 RPS5P46782 204 aaKnown RBP19.13■□□□□ 0.65
COL9A3-211ENST00000477612 BSPH1Q075Z2 132 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 OR1Q1Q15612 314 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 DUSP7Q16829 419 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 CYP51A1Q16850 503 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 TRMT5Q32P41 509 aaKnown RBP19.13■□□□□ 0.65
COL9A3-211ENST00000477612 ALKBH2Q6NS38 261 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 AAED1Q7RTV5 226 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 POMGNT2Q8NAT1 580 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 OR6S1Q8NH40 331 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 SLC47A1Q96FL8 570 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 PRR14Q9BWN1 585 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 SAR1AQ9NR31 198 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 ZNF701Q9NV72 531 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-211ENST00000477612 NPAP1Q9NZP6 1156 aa19.13■□□□□ 0.65
COL9A3-211ENST00000477612 USF3Q68DE3 2245 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 CCT8L1PA6NM43 557 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 FMO6PO60774 539 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 MPGP29372 298 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 RGS8P57771 180 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-211ENST00000477612 KLF10Q13118 480 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 CYLC2Q14093 348 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-211ENST00000477612 FAM69AQ5T7M9 428 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 NANOGP8Q6NSW7 305 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 GPAT4Q86UL3 456 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 EPHX4Q8IUS5 362 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 P3H2Q8IVL5 708 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 C17orf78Q8N4C9 275 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 OR10A6Q8NH74 314 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 TAAR8Q969N4 342 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 ARHGDIGQ99819 225 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 SLCO5A1Q9H2Y9 848 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 NANOGQ9H9S0 305 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 TMEM27Q9HBJ8 222 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 MED4Q9NPJ6 270 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 PLCE1Q9P212 2302 aa19.12■□□□□ 0.65
COL9A3-211ENST00000477612 LOC102725191A0A1B0GVB3 256 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 FXYD1O00168 92 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 VIMP08670 466 aaKnown RBP19.11■□□□□ 0.65
COL9A3-211ENST00000477612 DANCRP0C864 163 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 PCGF2P35227 344 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 RIPPLY3P57055 190 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 GUCY1A3Q02108 690 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 NRF1Q16656 503 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 ZNF672Q499Z4 452 aaPredicted RBP19.11■□□□□ 0.65
COL9A3-211ENST00000477612 HSP90B2PQ58FF3 399 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 SWT1Q5T5J6 900 aaKnown RBP19.11■□□□□ 0.65
COL9A3-211ENST00000477612 LINC00114Q6XXX2 140 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 CCDC80Q76M96 950 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 PATL1Q86TB9 770 aaKnown RBP19.11■□□□□ 0.65
COL9A3-211ENST00000477612 CALHM3Q86XJ0 350 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 WDR31Q8NA23 367 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 SMYD1Q8NB12 490 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 GPR32P1Q8NGA4 272 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 TMEM171Q8WVE6 324 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 FBXW5Q969U6 566 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 SLC25A36Q96CQ1 311 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 LRRC58Q96CX6 371 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 SH3GL1Q99961 368 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 KLHL14Q9P2G3 628 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 SLC13A4Q9UKG4 626 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 B3GALT5Q9Y2C3 310 aa19.11■□□□□ 0.65
COL9A3-211ENST00000477612 C2CD3Q4AC94 2353 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 TRAV36DV7A0A075B6V5 113 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 OR6C65A6NJZ3 312 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 BBIP1A8MTZ0 92 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 SHISA9B4DS77 424 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 PTH2RP49190 550 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 NCALDP61601 193 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 TGFBR3Q03167 851 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 VMACQ2NL98 169 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 Q5PR19 223 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 INTS11Q5TA45 600 aaKnown RBP19.1■□□□□ 0.65
COL9A3-211ENST00000477612 RANBP3LQ86VV4 465 aaPredicted RBP19.1■□□□□ 0.65
COL9A3-211ENST00000477612 ADPRHL1Q8NDY3 354 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 OR8J3Q8NGG0 315 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 OR52N5Q8NH56 324 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 SLC41A3Q96GZ6 507 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 RADILQ96JH8 1075 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 OXGR1Q96P68 337 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 LINC00470Q9BZP3 86 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 SLC17A5Q9NRA2 495 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 B3GAT1Q9P2W7 334 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 MGAT4BQ9UQ53 548 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 ALPK2Q86TB3 2170 aa19.1■□□□□ 0.65
COL9A3-211ENST00000477612 SETD2Q9BYW2 2564 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-211ENST00000477612 OVOL3O00110 214 aa19.09■□□□□ 0.65
COL9A3-211ENST00000477612 AIM2O14862 343 aa19.09■□□□□ 0.65
COL9A3-211ENST00000477612 CLOCKO15516 846 aa19.09■□□□□ 0.65
COL9A3-211ENST00000477612 ZNF432O94892 652 aa19.09■□□□□ 0.65
COL9A3-211ENST00000477612 PTAFRP25105 342 aa19.09■□□□□ 0.65
COL9A3-211ENST00000477612 SELENOPP49908 381 aa19.09■□□□□ 0.65
COL9A3-211ENST00000477612 MFSD13AQ14CX5 517 aa19.09■□□□□ 0.65
COL9A3-211ENST00000477612 MAPRE2Q15555 327 aa19.09■□□□□ 0.65
COL9A3-211ENST00000477612 ZNF613Q6PF04 617 aa19.09■□□□□ 0.65
COL9A3-211ENST00000477612 ABHD12BQ7Z5M8 362 aaPredicted RBP19.09■□□□□ 0.65
COL9A3-211ENST00000477612 KBTBD8Q8NFY9 601 aa19.09■□□□□ 0.65
COL9A3-211ENST00000477612 NEUROG1Q92886 237 aa19.09■□□□□ 0.65
COL9A3-211ENST00000477612 ZNF317Q96PQ6 595 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms