RNA–Protein interactions for RNA: ENST00000477581.1

DENND1B-208, Transcript of DENN domain containing 1B, human

TSL 3

Gene DENND1B, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND1B-208	ENST00000477581	AMBRA1	Q9C0C7	1298 aa		12.8	□□□□□ -0.36
DENND1B-208	ENST00000477581	KLHL4	Q9C0H6	718 aa		12.8	□□□□□ -0.36
DENND1B-208	ENST00000477581	REEP1	Q9H902	201 aa		12.8	□□□□□ -0.36
DENND1B-208	ENST00000477581	TMEM27	Q9HBJ8	222 aa		12.8	□□□□□ -0.36
DENND1B-208	ENST00000477581	PLSCR4	Q9NRQ2	329 aa		12.8	□□□□□ -0.36
DENND1B-208	ENST00000477581	RLIM	Q9NVW2	624 aa		12.8	□□□□□ -0.36
DENND1B-208	ENST00000477581	SELENON	Q9NZV5	590 aa		12.8	□□□□□ -0.36
DENND1B-208	ENST00000477581	NDUFAF4	Q9P032	175 aa		12.8	□□□□□ -0.36
DENND1B-208	ENST00000477581	RPS6KB2	Q9UBS0	482 aa		12.8	□□□□□ -0.36
DENND1B-208	ENST00000477581	KIAA1549	Q9HCM3	1950 aa		12.8	□□□□□ -0.36
DENND1B-208	ENST00000477581	ZFHX3	Q15911	3703 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	MTOR	P42345	2549 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	C17orf51	A8MQB3	221 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	GMFG	O60234	142 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	E2F6	O75461	281 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	OR5F1	O95221	314 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	MT-ND1	P03886	318 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	INHBB	P09529	407 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	LINGO3	P0C6S8	592 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	ARHGDIA	P52565	204 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	SPIB	Q01892	262 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	ZNF117	Q03924	483 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	SLC34A1	Q06495	639 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	EPS8	Q12929	822 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	RNPS1	Q15287	305 aa	Known RBP	12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	EXOC3L2	Q2M3D2	409 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	PLPPR5	Q32ZL2	321 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	SWT1	Q5T5J6	900 aa	Known RBP	12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	HBM	Q6B0K9	141 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	ZNF613	Q6PF04	617 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	APOOL	Q6UXV4	268 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	OFCC1	Q8IZS5	231 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	ZNF610	Q8N9Z0	462 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	PIK3C3	Q8NEB9	887 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	WFDC11	Q8NEX6	87 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	OR5W2	Q8NH69	310 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	TMEM234	Q8WY98	164 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	CPNE4	Q96A23	557 aa	Predicted RBP	12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	KLHL15	Q96M94	604 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	MCHR1	Q99705	422 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	FNDC11	Q9BVV2	318 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	HDHD5	Q9BXW7	423 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	RTN4R	Q9BZR6	473 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	VCX3B	Q9H321	246 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	ANKRD19P	Q9H560	264 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	UBTD1	Q9HAC8	227 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	GP6	Q9HCN6	339 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	NGB	Q9NPG2	151 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	MED17	Q9NVC6	651 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	CARD8	Q9Y2G2	431 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	CHST2	Q9Y4C5	530 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	NF1	P21359	2839 aa		12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	PRRC2A	P48634	2157 aa	Known RBP	12.79	□□□□□ -0.36
DENND1B-208	ENST00000477581	SETD2	Q9BYW2	2564 aa	Predicted RBP	12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	TRAPPC13	A5PLN9	417 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	DEFB108A	A8MXU0	73 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581		H0YC42	278 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	FRS3	O43559	492 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	AQP8	O94778	261 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	NUDT14	O95848	222 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	H1F0	P07305	194 aa	Known RBP	12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	TPD52	P55327	224 aa	Predicted RBP	12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	CARD18	P57730	90 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	ST3GAL3	Q11203	375 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581		Q5PR19	223 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	TMEM201	Q5SNT2	666 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	COMTD1	Q86VU5	262 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	CXorf67	Q86X51	503 aa	Predicted RBP	12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	SVOPL	Q8N434	492 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	LSMEM1	Q8N8F7	131 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	STEAP2	Q8NFT2	490 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	LRTOMT	Q8WZ04	291 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	ARSG	Q96EG1	525 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	SH3YL1	Q96HL8	342 aa	Predicted RBP	12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	VCX	Q9H320	206 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	C8orf4	Q9NR00	106 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	RIMS3	Q9UJD0	308 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	GPR52	Q9Y2T5	361 aa		12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	SAMHD1	Q9Y3Z3	626 aa	Known RBP	12.78	□□□□□ -0.36
DENND1B-208	ENST00000477581	ABCA4	P78363	2273 aa		12.77	□□□□□ -0.36
DENND1B-208	ENST00000477581	CXCL13	O43927	109 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	GADD45G	O95257	159 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	GKN3P	P0CG01	181 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	RRM2	P31350	389 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	CCKAR	P32238	428 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	RNF144A	P50876	292 aa	Predicted RBP	12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	TRAM2	Q15035	370 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	NPTX1	Q15818	432 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	SNCB	Q16143	134 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	ENTPD8	Q5MY95	495 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	WBP2NL	Q6ICG8	309 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	SSX8	Q7RTT4	187 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	LILRA2	Q8N149	483 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	LINC00471	Q8N535	108 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	OR4D11	Q8NGI4	311 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	ZNF563	Q8TA94	476 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	ADAMTS16	Q8TE57	1224 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	DNAJA4	Q8WW22	397 aa	Predicted RBP	12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	ST8SIA1	Q92185	356 aa		12.77	□□□□□ -0.37
DENND1B-208	ENST00000477581	ZC3HAV1L	Q96H79	300 aa	Known RBP	12.77	□□□□□ -0.37

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