RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 NXNL2Q5VZ03 156 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 CXXC5Q7LFL8 322 aaKnown RBP13.03□□□□□ -0.32
COL4A6-206ENST00000477085 STX19Q8N4C7 294 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 SLC37A3Q8NCC5 494 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 OR13F1Q8NGS4 319 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 OR4K13Q8NH42 304 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 ZPLD1Q8TCW7 415 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 LGALS12Q96DT0 336 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 PLEKHA8Q96JA3 519 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 TEX12Q9BXU0 123 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 FAM192AQ9GZU8 254 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 PTGES2Q9H7Z7 377 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 MRPS18AQ9NVS2 196 aaKnown RBP13.03□□□□□ -0.32
COL4A6-206ENST00000477085 TEKT2Q9UIF3 430 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 BAIAP2Q9UQB8 552 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 MPDZO75970 2070 aa13.03□□□□□ -0.32
COL4A6-206ENST00000477085 MED13Q9UHV7 2174 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 LAMA5O15230 3695 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 ARPC3O15145 178 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 SEC14L2O76054 403 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 MT-ATP6P00846 226 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 LCKP06239 509 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 HK1P19367 917 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 DSCR4P56555 118 aaPredicted RBP13.02□□□□□ -0.32
COL4A6-206ENST00000477085 SOX8P57073 446 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 FOXO1Q12778 655 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 NIPAL3Q6P499 406 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 CCDC81Q6ZN84 652 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 SHFQ7M4L6 423 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 NPEPL1Q8NDH3 523 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 OR52E2Q8NGJ4 325 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 OR52I1Q8NGK6 324 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 ZNRF4Q8WWF5 429 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 THAP4Q8WY91 577 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 KISS1RQ969F8 398 aaPredicted RBP13.02□□□□□ -0.32
COL4A6-206ENST00000477085 OTULINQ96BN8 352 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 RASD2Q96D21 266 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 RNFT2Q96EX2 444 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 Q96M85 177 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 CDCA4Q9BXL8 241 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 FN3KQ9H479 309 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 TMEM185BQ9H7F4 350 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 CLEC2DQ9UHP7 191 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 WASF3Q9UPY6 502 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 COMMD3-BMI1R4GMX3 469 aa13.02□□□□□ -0.32
COL4A6-206ENST00000477085 SMIM31A0A1B0GVY4 71 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 CCDC182A6NF36 153 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 M0R082 166 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 PLPP3O14495 311 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 CBR3O75828 277 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 PTHP01270 115 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 HIST1H2ABP04908 130 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 CD14P08571 375 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 CNR1P21554 472 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 SLC2A5P22732 501 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 ADH6P28332 368 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 HTR1FP30939 366 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 CDH11P55287 796 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 CTXN1P60606 82 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 ARHGAP11AQ6P4F7 1023 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 HIST3H2AQ7L7L0 130 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 MAMDC2Q7Z304 686 aaPredicted RBP13.02□□□□□ -0.33
COL4A6-206ENST00000477085 NANOGNBQ7Z5D8 188 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 GPR141Q7Z602 305 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 GTPBP8Q8N3Z3 284 aaPredicted RBP13.02□□□□□ -0.33
COL4A6-206ENST00000477085 SDR9C7Q8NEX9 313 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 OR5J2Q8NH18 312 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 ZNF417Q8TAU3 575 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 HIST1H2ACQ93077 130 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 ZBTB8AQ96BR9 441 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 ZNF587Q96SQ5 575 aaPredicted RBP13.02□□□□□ -0.33
COL4A6-206ENST00000477085 UTP23Q9BRU9 249 aaKnown RBP13.02□□□□□ -0.33
COL4A6-206ENST00000477085 POTEKPQ9BYX7 375 aa13.02□□□□□ -0.33
COL4A6-206ENST00000477085 A0A087WZY1 265 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 TEX13CA0A0J9YWL9 993 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 OR6C68A6NDL8 312 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 LIPT2A6NK58 231 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 ZNF99A8MXY4 864 aaPredicted RBP13.01□□□□□ -0.33
COL4A6-206ENST00000477085 MS4A18H0YCH9 400 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 OR2T1O43869 369 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 AHSA1O95433 338 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 CDKN2AP42771 156 aaKnown RBP13.01□□□□□ -0.33
COL4A6-206ENST00000477085 MTNR1AP48039 350 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 B3GALT5-AS1P59052 145 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.01□□□□□ -0.33
COL4A6-206ENST00000477085 FOXC1Q12948 553 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 MYBPHQ13203 477 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 OR1C1Q15619 314 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 OR7A5Q15622 319 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 SGCBQ16585 318 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 MS4A18Q3C1V0 323 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 ANKDD1AQ495B1 522 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 GLYR1Q49A26 553 aaPredicted RBP13.01□□□□□ -0.33
COL4A6-206ENST00000477085 SYT6Q5T7P8 510 aaPredicted RBP13.01□□□□□ -0.33
COL4A6-206ENST00000477085 BORAQ6PGQ7 559 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 PAQR6Q6TCH4 344 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 C5orf46Q6UWT4 87 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 B3GNT6Q6ZMB0 384 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 GHDCQ8N2G8 530 aa13.01□□□□□ -0.33
COL4A6-206ENST00000477085 KDM8Q8N371 416 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms