RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 SENP8Q96LD8 212 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 APMAPQ9HDC9 416 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 TREM2Q9NZC2 230 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 IL36GQ9NZH8 169 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 RPH3ALQ9UNE2 315 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 SNX6Q9UNH7 406 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 RASD1Q9Y272 281 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 CDH10Q9Y6N8 788 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 MAP3K19Q56UN5 1328 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 KIF16BQ96L93 1317 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 OVOS2A0A0G2JMS6 1433 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 OVOS2A0A0J9YW53 1432 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 OVOS2Q6IE36 1432 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 EDC4Q6P2E9 1401 aaKnown RBP3.33□□□□□ -1.88
PTCD3-211ENST00000476215 CD163L1Q9NR16 1453 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 TRPM1Q7Z4N2 1603 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 TOPAZ1Q8N9V7 1692 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 LMO7Q8WWI1 1683 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 COL18A1P39060 1754 aa3.33□□□□□ -1.88
PTCD3-211ENST00000476215 PANO1I0J062 215 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 NDC80O14777 642 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 CXCL13O43927 109 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 P2RY1P47900 373 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 PPT1P50897 306 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 ZNF133P52736 654 aaPredicted RBP3.32□□□□□ -1.88
PTCD3-211ENST00000476215 ARFRP1Q13795 201 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 SLC25A52Q3SY17 297 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 TTC23Q5W5X9 447 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 TPGS2Q68CL5 300 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 OR1F12Q8NHA8 337 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 RNF138Q8WVD3 245 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 ST8SIA1Q92185 356 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 LINC00167Q96N53 147 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 TTC25Q96NG3 672 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 NIPSNAP3BQ9BS92 247 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 RMND5AQ9H871 391 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 A0A1W2PP64 1363 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 NINLQ9Y2I6 1382 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 NFAT5O94916 1531 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 NRKQ7Z2Y5 1582 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 PHRF1Q9P1Y6 1649 aaKnown RBP3.32□□□□□ -1.88
PTCD3-211ENST00000476215 QRICH2Q9H0J4 1663 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 GTF3C1Q12789 2109 aa3.32□□□□□ -1.88
PTCD3-211ENST00000476215 RGPD1P0DJD0 1748 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 PIK3C2AO00443 1686 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 KDRP35968 1356 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 A0A1B0GUS0 222 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 LRP5LA4QPB2 252 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 TAPBPO15533 448 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 ZNF780AO75290 641 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-211ENST00000476215 HTR1EP28566 365 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 HTR1FP30939 366 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 TDO2P48775 406 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 KRTAP10-8P60410 259 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 MESDQ14696 234 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 ZNF530Q6P9A1 599 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-211ENST00000476215 TEX9Q8N6V9 391 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 C20orf203Q8NBC4 194 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 CCNL2Q96S94 520 aaPredicted RBP3.31□□□□□ -1.88
PTCD3-211ENST00000476215 TBX15Q96SF7 602 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 ZNF670Q9BS34 389 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 TUBGCP2Q9BSJ2 902 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 VCPKMTQ9H867 229 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 EPS15L1Q9UBC2 864 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 PCSK1NQ9UHG2 260 aa3.31□□□□□ -1.88
PTCD3-211ENST00000476215 MRPS33Q9Y291 106 aaKnown RBP3.31□□□□□ -1.88
PTCD3-211ENST00000476215 ANKRD36BQ8N2N9 1353 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 USP47Q96K76 1375 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 MBLAC1A4D2B0 266 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-211ENST00000476215 PSMB11A5LHX3 300 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 PINLYPA6NC86 204 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 A8MUA0 341 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 TRDCB7Z8K6 153 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 K7EQM0 130 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 LGALS2P05162 132 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 IQCF3P0C7M6 154 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 PNMTP11086 282 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 NR2C1P13056 603 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 HNF1AP20823 631 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 IMPDH1P20839 514 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 ATP6V1B2P21281 511 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 COX7A1P24310 79 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 MMP11P24347 488 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 HMGB2P26583 209 aaKnown RBP3.3□□□□□ -1.88
PTCD3-211ENST00000476215 NUP107P57740 925 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 NSDHLQ15738 373 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 NSUN5P1Q3KNT7 163 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 PAGE3Q5JUK9 113 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 C1orf146Q5VVC0 180 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 CCDC80Q76M96 950 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 ZNF683Q8IZ20 524 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 ANKFN1Q8N957 763 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 LINC01555Q8NAE3 123 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 OR4D5Q8NGN0 318 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 NEIL3Q8TAT5 605 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 TRMT10AQ8TBZ6 339 aaKnown RBP3.3□□□□□ -1.88
PTCD3-211ENST00000476215 CHCHD10Q8WYQ3 142 aaPredicted RBP3.3□□□□□ -1.88
PTCD3-211ENST00000476215 TGM7Q96PF1 710 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 TSGA13Q96PP4 275 aa3.3□□□□□ -1.88
PTCD3-211ENST00000476215 ZNF607Q96SK3 696 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms