RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 C3orf36Q3SXR2 165 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 SLC9B1Q4ZJI4 515 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 C1orf140Q5VVS0 124 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 NXNQ6DKJ4 435 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 PODNL1Q6PEZ8 512 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 KLHL24Q6TFL4 600 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 CREB3L2Q70SY1 520 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 CXXC5Q7LFL8 322 aaKnown RBP8.67□□□□□ -1.02
PTPN7-208ENST00000476061 MAVSQ7Z434 540 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 ANKK1Q8NFD2 765 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 MFSD8Q8NHS3 518 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 MAGEE2Q8TD90 523 aaPredicted RBP8.67□□□□□ -1.02
PTPN7-208ENST00000476061 PROX1Q92786 737 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 TNFRSF13CQ96RJ3 184 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 LINC00470Q9BZP3 86 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 RAD21L1Q9H4I0 556 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 C12orf10Q9HB07 376 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 CACYBPQ9HB71 228 aaKnown RBP8.67□□□□□ -1.02
PTPN7-208ENST00000476061 TMEM45AQ9NWC5 275 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 TMEM160Q9NX00 188 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 RASD1Q9Y272 281 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 CHST2Q9Y4C5 530 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 GMEB1Q9Y692 573 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 PMF1-BGLAPU3KQ54 211 aa8.67□□□□□ -1.02
PTPN7-208ENST00000476061 ARPC4-TTLL3A0A0A6YYG9 625 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 A8MV72 311 aaPredicted RBP8.66□□□□□ -1.02
PTPN7-208ENST00000476061 FTCDNL1E5RQL4 147 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 UBDO15205 165 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 TGDSO95455 350 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 F12P00748 615 aaPredicted RBP8.66□□□□□ -1.02
PTPN7-208ENST00000476061 IFNA2P01563 188 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 ETS2P15036 469 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 NCF2P19878 526 aaPredicted RBP8.66□□□□□ -1.02
PTPN7-208ENST00000476061 PTNP21246 168 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 EFNA4P52798 201 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 VLDLRP98155 873 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 RGNQ15493 299 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 SWI5Q1ZZU3 235 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 ZNF311Q5JNZ3 666 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 C9orf135Q5VTT2 229 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 EPGNQ6UW88 154 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 C5orf46Q6UWT4 87 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 C6orf89Q6UWU4 347 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 GPAT4Q86UL3 456 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 EPHX4Q8IUS5 362 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 MIER2Q8N344 545 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 CLIP4Q8N3C7 705 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 CADM2Q8N3J6 435 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 FAM169BQ8N8A8 192 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 LSMEM1Q8N8F7 131 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 OR1K1Q8NGR3 316 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 BBS10Q8TAM1 723 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 FAM168AQ92567 244 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 GTF2H4Q92759 462 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 C3orf49Q96BT1 292 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 AURKBQ96GD4 344 aaPredicted RBP8.66□□□□□ -1.02
PTPN7-208ENST00000476061 TMEM19Q96HH6 336 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 KATNB1Q9BVA0 655 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 C1QTNF6Q9BXI9 259 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 CCDC134Q9H6E4 229 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 A4GALTQ9NPC4 353 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 YAE1D1Q9NRH1 226 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 ADPRHL2Q9NX46 363 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 CRNNQ9UBG3 495 aaPredicted RBP8.66□□□□□ -1.02
PTPN7-208ENST00000476061 FBXO9Q9UK97 447 aaPredicted RBP8.66□□□□□ -1.02
PTPN7-208ENST00000476061 RCE1Q9Y256 329 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 ATP23Q9Y6H3 246 aa8.66□□□□□ -1.02
PTPN7-208ENST00000476061 ARFGEF3Q5TH69 2177 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 LOC102725191A0A1B0GVB3 256 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 ZNF587BE7ETH6 402 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 RPL36A-HNRNPH2H7BZ11 118 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 NDUFS8O00217 210 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 CLIC1O00299 241 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 OR2T1O43869 369 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 GPRIN2O60269 458 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 KRT33AO76009 404 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 PDE5AO76074 875 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 AHSA1O95433 338 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 VIMP08670 466 aaKnown RBP8.65□□□□□ -1.02
PTPN7-208ENST00000476061 PRG2P13727 222 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 HOXB9P17482 250 aaPredicted RBP8.65□□□□□ -1.02
PTPN7-208ENST00000476061 IDH3AP50213 366 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 AQP5P55064 265 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 SH3BGRP55822 239 aaPredicted RBP8.65□□□□□ -1.02
PTPN7-208ENST00000476061 EGR4Q05215 589 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 BNIP2Q12982 314 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 TMEM249Q2WGJ8 235 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 TBRG1Q3YBR2 411 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 CHRFAM7AQ494W8 412 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 GTDC1Q4AE62 458 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 C6orf10Q5SRN2 563 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 LRIF1Q5T3J3 769 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 C6orf52Q5T4I8 152 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 HMBOX1Q6NT76 420 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 NET1Q7Z628 596 aaPredicted RBP8.65□□□□□ -1.02
PTPN7-208ENST00000476061 SERPINA11Q86U17 422 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 C10orf105Q8TEF2 133 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 VPS33AQ96AX1 596 aa8.65□□□□□ -1.02
PTPN7-208ENST00000476061 THOC1Q96FV9 657 aaKnown RBP8.65□□□□□ -1.02
PTPN7-208ENST00000476061 OR52B2Q96RD2 323 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms