RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MEF2DQ14814 521 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 OR8B8Q15620 311 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 C14orf28Q4W4Y0 310 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 FAM69AQ5T7M9 428 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 OLIG3Q7RTU3 272 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 AAED1Q7RTV5 226 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 SDHAF2Q9NX18 166 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 SIDT1Q9NXL6 827 aaKnown RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 GAPDHSO14556 408 aaPredicted RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 TCN2P20062 427 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 TACR1P25103 407 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 SLC5A2P31639 672 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 TSFMP43897 325 aaKnown RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 INHBCP55103 352 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 TMEM71Q6P5X7 295 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 METAP1DQ6UB28 335 aaPredicted RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 STEAP2Q8NFT2 490 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 ZNF576Q9H609 170 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 GAREM1Q9H706 876 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 ZMAT3Q9HA38 289 aaKnown RBP10.19□□□□□ -0.78
VAPB-204ENST00000475243 BIN3Q9NQY0 253 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 TAS2R16Q9NYV7 291 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 GPR160Q9UJ42 338 aa10.19□□□□□ -0.78
VAPB-204ENST00000475243 MEIOCA2RUB1 952 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 GALR3O60755 368 aaPredicted RBP10.18□□□□□ -0.78
VAPB-204ENST00000475243 SNRPBP14678 240 aaKnown RBP10.18□□□□□ -0.78
VAPB-204ENST00000475243 CARD18P57730 90 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 AADACL3Q5VUY0 350 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 MED25Q71SY5 747 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 SLC35F3Q8IY50 421 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 DNAJC22Q8N4W6 341 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 RCE1Q9Y256 329 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 KNTC1P50748 2209 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 ITGB2P05107 769 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 TNFSF8P32971 234 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 ADRA1AP35348 466 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 PDLIM3Q53GG5 364 aaPredicted RBP10.18□□□□□ -0.78
VAPB-204ENST00000475243 FAM83HQ6ZRV2 1179 aaPredicted RBP10.18□□□□□ -0.78
VAPB-204ENST00000475243 PARP16Q8N5Y8 322 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 EDAQ92838 391 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 FOXRED1Q96CU9 486 aaPredicted RBP10.18□□□□□ -0.78
VAPB-204ENST00000475243 TUBB1Q9H4B7 451 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 WIF1Q9Y5W5 379 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 SLX4Q8IY92 1834 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 BCDIN3DQ7Z5W3 292 aaKnown RBP10.18□□□□□ -0.78
VAPB-204ENST00000475243 OR14A16Q8NHC5 309 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 RBMXL1Q96E39 390 aaKnown RBP10.18□□□□□ -0.78
VAPB-204ENST00000475243 DECR2Q9NUI1 292 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 TMX2-CTNND1H3BSU7 103 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 RAB38P57729 211 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 SHEQ5VZ18 495 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 GAREM2Q75VX8 874 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 SLC7A13Q8TCU3 470 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 ATG4BQ9Y4P1 393 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 SEC14L2O76054 403 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 TAZQ16635 292 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 ZNF534Q76KX8 674 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 BLACEA4D250 179 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 KITLGP21583 273 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 POLR2IP36954 125 aaKnown RBP10.18□□□□□ -0.78
VAPB-204ENST00000475243 MPEG1Q2M385 716 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 LRRC28Q86X40 367 aaPredicted RBP10.18□□□□□ -0.78
VAPB-204ENST00000475243 SEC22AQ96IW7 307 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 NMNAT3Q96T66 252 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 ALG12Q9BV10 488 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 PITHD1Q9GZP4 211 aaPredicted RBP10.18□□□□□ -0.78
VAPB-204ENST00000475243 IL37Q9NZH6 218 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 COPS3Q9UNS2 423 aa10.18□□□□□ -0.78
VAPB-204ENST00000475243 A0A1W2PQ09 198 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 TNFRSF10AO00220 468 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 CD63P08962 238 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 GCAP28676 217 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 TAS2R19P59542 299 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 SPCS2Q15005 226 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 LYPD4Q6UWN0 246 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 GDPGP1Q6ZNW5 385 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 METTL4Q8N3J2 472 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 MRI1Q9BV20 369 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 FAM53CQ9NYF3 392 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 TCRBV3S1A0A5B6 114 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 EFSO43281 561 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 GRPP07492 148 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 HOXC13P31276 330 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 FXNQ16595 210 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 NPSR1Q6W5P4 371 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 KDM8Q8N371 416 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 ASB17Q8WXJ9 295 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 DAZAP1Q96EP5 407 aaKnown RBP10.17□□□□□ -0.78
VAPB-204ENST00000475243 GIMAP5Q96F15 307 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 SEMA6CQ9H3T2 930 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 LRRC37A3O60309 1634 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 MCRIP1C9JLW8 97 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 SULT1B1O43704 296 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 OPRD1P41143 372 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 DAPP51397 102 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 CNTN4Q8IWV2 1026 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 ZFAND1Q8TCF1 268 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 SGPP1Q9BX95 441 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 NMNAT2Q9BZQ4 307 aa10.17□□□□□ -0.78
VAPB-204ENST00000475243 ASB4Q9Y574 426 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms