RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 TSPEARQ8WU66 669 aa12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 DYDC1Q8WWB3 177 aa12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 AURKBQ96GD4 344 aaPredicted RBP12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 ZNF607Q96SK3 696 aa12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 LINC00470Q9BZP3 86 aa12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 MRGBPQ9NV56 204 aa12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 FBXO9Q9UK97 447 aaPredicted RBP12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 POU2F3Q9UKI9 436 aa12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 RCE1Q9Y256 329 aa12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 B3GALT5Q9Y2C3 310 aa12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 PLCE1Q9P212 2302 aa12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 FN1P02751 2386 aaKnown RBP12.32□□□□□ -0.44
DNMT3A-211ENST00000474887 ELOA3DA6NLF2 546 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 HMGB1P1B2RPK0 211 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 ZNF587BE7ETH6 402 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 FRS3O43559 492 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 ARAFP10398 606 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 SLC6A2P23975 617 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 GTF2E2P29084 291 aaKnown RBP12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 ZNF83P51522 516 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 CDK6Q00534 326 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 VEZF1Q14119 521 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 SQLEQ14534 574 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 ELOA3BQ3SY89 546 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 GTDC1Q4AE62 458 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 ULK3Q6PHR2 472 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 SERPINA11Q86U17 422 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 GPAT4Q86UL3 456 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 FUNDC1Q8IVP5 155 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 CCDC36Q8IYA8 594 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 PIAS4Q8N2W9 510 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 ELOA3Q8NG57 546 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 OR52E4Q8NGH9 312 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 NEUROG1Q92886 237 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 SLC38A4Q969I6 547 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 ZBTB9Q96C00 473 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 SIKE1Q9BRV8 207 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 REG4Q9BYZ8 158 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 ADPRHL2Q9NX46 363 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 SELENONQ9NZV5 590 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 CCDC167Q9P0B6 97 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 TRIM33Q9UPN9 1127 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 CHST2Q9Y4C5 530 aa12.31□□□□□ -0.44
DNMT3A-211ENST00000474887 FTCDNL1E5RQL4 147 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 E7EQL1 145 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 M0R1B8 84 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 TLX2O43763 284 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 AKAP8O43823 692 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 VIMP08670 466 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 PRG2P13727 222 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 APOBEC3AP31941 199 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 FABP6P51161 128 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 P2RY4P51582 365 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 AQP5P55064 265 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 RBBP4Q09028 425 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 SWT1Q5T5J6 900 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 Q71RC1 249 aaPredicted RBP12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 HDXQ7Z353 690 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 MUC15Q8N387 334 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 ADPRHL1Q8NDY3 354 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 SLC47A1Q96FL8 570 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 OXGR1Q96P68 337 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 EPYCQ99645 322 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 RHNO1Q9BSD3 238 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 VIPAS39Q9H9C1 493 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 SLC52A3Q9NQ40 469 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 INTS9Q9NV88 658 aaKnown RBP12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 SLC25A37Q9NYZ2 338 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 SLC13A4Q9UKG4 626 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 CORINQ9Y5Q5 1042 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 PMF1-BGLAPU3KQ54 211 aa12.3□□□□□ -0.44
DNMT3A-211ENST00000474887 TRBV5-3A0A0A0MS03 114 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 ARPC4-TTLL3A0A0A6YYG9 625 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 VSTM5A8MXK1 200 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 RPL36A-HNRNPH2H7BZ11 118 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 H7C417 338 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 NR5A2O00482 541 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 AIM2O14862 343 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 IGHV4-39P01824 125 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 TP53P04637 393 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 CSF3P09919 207 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 NUDT7P0C024 238 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 ZNF43P17038 809 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 CDKN1AP38936 164 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 RAB35Q15286 201 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 AGKQ53H12 422 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 RPS26P11Q5JNZ5 115 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 FAM69AQ5T7M9 428 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 METTL21CQ5VZV1 264 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 ANKRD16Q6P6B7 361 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 H1FNTQ75WM6 255 aaPredicted RBP12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 EPHX4Q8IUS5 362 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 SLC30A8Q8IWU4 369 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 MAL2Q969L2 176 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 DNAJA3Q96EY1 480 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 ZNF385AQ96PM9 386 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 TMEM27Q9HBJ8 222 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 SLCO1B3Q9NPD5 702 aa12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 TESQ9UGI8 421 aaKnown RBP12.29□□□□□ -0.44
DNMT3A-211ENST00000474887 TRAV36DV7A0A075B6V5 113 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms