RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 HEATR1Q9H583 2144 aaKnown RBP6.22□□□□□ -1.41
LIMD1-204ENST00000474665 A0A087WUU8 490 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 A0A1B0GUH1 482 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 A0A1W2PRQ8 180 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 DHRS12A0PJE2 317 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 GJE1A6NN92 205 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF716A6NP11 495 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 ANKRD65E5RJM6 399 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 SULT2B1O00204 365 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 CYTIPO60759 359 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 GMNNO75496 209 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 AKR7A3O95154 331 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 RCBTB2O95199 551 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 HPRP00739 348 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 THRBP10828 461 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 FKBP2P26885 142 aaKnown RBP6.22□□□□□ -1.41
LIMD1-204ENST00000474665 SLC7A1P30825 629 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 TIMP3P35625 211 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 KIR2DL2P43627 348 aaPredicted RBP6.22□□□□□ -1.41
LIMD1-204ENST00000474665 RPS5P46782 204 aaKnown RBP6.22□□□□□ -1.41
LIMD1-204ENST00000474665 LIMS1P48059 325 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 IST1P53990 364 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 TAS2R41P59536 307 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 PPP1R8Q12972 351 aaKnown RBP6.22□□□□□ -1.41
LIMD1-204ENST00000474665 DGCR6Q14129 220 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 OR7A5Q15622 319 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 ZSCAN26Q16670 478 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 RIPPLY2Q5TAB7 128 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 PODNL1Q6PEZ8 512 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 TMEM179BQ7Z7N9 219 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 MRGPRGQ86SM5 289 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 ZDHHC21Q8IVQ6 265 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 GCNT2Q8N0V5 402 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 LRRC17Q8N6Y2 441 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 TMEM99Q8N816 258 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 ZIC4Q8N9L1 334 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 PAPD5Q8NDF8 572 aaKnown RBP6.22□□□□□ -1.41
LIMD1-204ENST00000474665 OR4C15Q8NGM1 316 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 PFN4Q8NHR9 129 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 MFSD8Q8NHS3 518 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 INTS12Q96CB8 462 aaKnown RBP6.22□□□□□ -1.41
LIMD1-204ENST00000474665 C14orf79Q96F83 325 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 MPP4Q96JB8 637 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 PIP5K1AQ99755 562 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 GPA33Q99795 319 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 CHID1Q9BWS9 393 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 POLR2J2Q9GZM3 115 aaKnown RBP6.22□□□□□ -1.41
LIMD1-204ENST00000474665 POLR2J3Q9H1A7 115 aaKnown RBP6.22□□□□□ -1.41
LIMD1-204ENST00000474665 MAGIXQ9H6Y5 334 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 CCM2LQ9NUG4 571 aaPredicted RBP6.22□□□□□ -1.41
LIMD1-204ENST00000474665 B3GAT1Q9P2W7 334 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 RPS6KB2Q9UBS0 482 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 CLEC4AQ9UMR7 237 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 RNF6Q9Y252 685 aa6.22□□□□□ -1.41
LIMD1-204ENST00000474665 TRAV36DV7A0A075B6V5 113 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 IGKV3D-15A0A087WSY6 115 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 A0A1W2PNV4 684 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 AQP7P3A6NL99 342 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 MS4A18H0YCH9 400 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 M0R082 166 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 KPNA4O00629 521 aaPredicted RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 KLF4O43474 513 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 DNPH1O43598 174 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 CH25HO95992 272 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 CGAP01215 116 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 FABP3P05413 133 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 H1F0P07305 194 aaKnown RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 TSPAN19P0C672 248 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 ASAH2BP0C7U1 165 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 RAP2AP10114 183 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 FOSL1P15407 271 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF26P17031 533 aaPredicted RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 FUT1P19526 365 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 MAKP20794 623 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 CBLP22681 906 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 GRPRP30550 384 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 IDUAP35475 653 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 RBM34P42696 430 aaKnown RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 HMGA2P52926 109 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 SLC16A1P53985 500 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 CASP6P55212 293 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 OR2B6P58173 313 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 ACTR3P61158 418 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 RPS3AP61247 264 aaKnown RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 SLC35A1P78382 337 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 TFF3Q07654 80 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 ST3GAL3Q11203 375 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 SLC17A1Q14916 467 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 KPNB1Q14974 876 aaKnown RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 SGCBQ16585 318 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF74Q16587 644 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 MS4A18Q3C1V0 323 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 FAM69AQ5T7M9 428 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 C1orf146Q5VVC0 180 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 ABLIM2Q6H8Q1 611 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF770Q6IQ21 691 aaPredicted RBP6.21□□□□□ -1.42
LIMD1-204ENST00000474665 VWA1Q6PCB0 445 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 PAQR6Q6TCH4 344 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 FCRLAQ7L513 359 aa6.21□□□□□ -1.42
LIMD1-204ENST00000474665 NUFIP2Q7Z417 695 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms