RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 M0R3H8 397 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 FXYD1O00168 92 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 FZD7O75084 574 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 VAMP5O95183 116 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 PTNP21246 168 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 GZMMP51124 257 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 KLF10Q13118 480 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 GABRA6Q16445 453 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 DUSP7Q16829 419 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 HSP90B2PQ58FF3 399 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 SHEQ5VZ18 495 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 FAM91A1Q658Y4 838 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 REP15Q6BDI9 236 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 ADAM5Q6NVV9 412 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 KDM8Q8N371 416 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 GPR32P1Q8NGA4 272 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 RNF217Q8TC41 542 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 SLC38A4Q969I6 547 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 TAAR8Q969N4 342 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 ARHGDIGQ99819 225 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 AMBRA1Q9C0C7 1298 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 SLCO5A1Q9H2Y9 848 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 PIF1Q9H611 641 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 CCDC134Q9H6E4 229 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 SAR1AQ9NR31 198 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 RASD1Q9Y272 281 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 SLC25A15Q9Y619 301 aa15.77■□□□□ 0.12
UPF3A-203ENST00000474056 A0A087WUJ7 227 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 LGI1O95970 557 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 GTF2E2P29084 291 aaKnown RBP15.76■□□□□ 0.11
UPF3A-203ENST00000474056 PCGF2P35227 344 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 SELENOPP49908 381 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 NRF1Q16656 503 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 RABL3Q5HYI8 236 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 FAM69AQ5T7M9 428 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 NANOGP8Q6NSW7 305 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 ULK3Q6PHR2 472 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 CREB3L2Q70SY1 520 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 RANBP3LQ86VV4 465 aaPredicted RBP15.76■□□□□ 0.11
UPF3A-203ENST00000474056 EPHX4Q8IUS5 362 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 TMEM171Q8WVE6 324 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 FBXW5Q969U6 566 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 SLC47A1Q96FL8 570 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 MUS81Q96NY9 551 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 NANOGQ9H9S0 305 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 TMEM27Q9HBJ8 222 aa15.76■□□□□ 0.11
UPF3A-203ENST00000474056 SHISA9B4DS77 424 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 M0R082 166 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 MRASO14807 208 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 ARHGEF9O43307 516 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 OR2T1O43869 369 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 CBLP22681 906 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 MPGP29372 298 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 GRPRP30550 384 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 PTH2RP49190 550 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 CDH12P55289 794 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 SLC25A3Q00325 362 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 LGALS3BPQ08380 585 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 CYLC2Q14093 348 aaPredicted RBP15.75■□□□□ 0.11
UPF3A-203ENST00000474056 NPTX1Q15818 432 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 VMACQ2NL98 169 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 MMEL1Q495T6 779 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 ZNF672Q499Z4 452 aaPredicted RBP15.75■□□□□ 0.11
UPF3A-203ENST00000474056 COQ5Q5HYK3 327 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 OR7E24Q6IFN5 339 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 NIPAL3Q6P499 406 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 C5orf46Q6UWT4 87 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 SSX8Q7RTT4 187 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 SNX32Q86XE0 403 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 SLC30A8Q8IWU4 369 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 WDR31Q8NA23 367 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 POMGNT2Q8NAT1 580 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 OR4D11Q8NGI4 311 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 ZNF417Q8TAU3 575 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 C10orf82Q8WW14 230 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 TAMM41Q96BW9 452 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 LRRC58Q96CX6 371 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 ZNF587Q96SQ5 575 aaPredicted RBP15.75■□□□□ 0.11
UPF3A-203ENST00000474056 MCHR1Q99705 422 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 GSX2Q9BZM3 304 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 EVA1AQ9H8M9 152 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 MED4Q9NPJ6 270 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 MRGBPQ9NV56 204 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 SELENONQ9NZV5 590 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 KLHL14Q9P2G3 628 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 LAMP3Q9UQV4 416 aa15.75■□□□□ 0.11
UPF3A-203ENST00000474056 TRAV36DV7A0A075B6V5 113 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 BBIP1A8MTZ0 92 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 ABCD4O14678 606 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 AIM2O14862 343 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 SOD3P08294 240 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 DANCRP0C864 163 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 CD247P20963 164 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 ZNF83P51522 516 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 CRYBA2P53672 197 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 LTBQ06643 244 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 SPOCK1Q08629 439 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 MAPRE2Q15555 327 aa15.74■□□□□ 0.11
UPF3A-203ENST00000474056 YTHDF3Q7Z739 585 aaKnown RBP15.74■□□□□ 0.11
UPF3A-203ENST00000474056 PATL1Q86TB9 770 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms