RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 FAM162AQ96A26 154 aa16.02■□□□□ 0.16
SNX4-204ENST00000473417 ZNF775Q96BV0 537 aaPredicted RBP16.02■□□□□ 0.16
SNX4-204ENST00000473417 KLHL4Q9C0H6 718 aa16.02■□□□□ 0.16
SNX4-204ENST00000473417 ADPRHL2Q9NX46 363 aa16.02■□□□□ 0.16
SNX4-204ENST00000473417 KLHL9Q9P2J3 617 aa16.02■□□□□ 0.16
SNX4-204ENST00000473417 NSD1Q96L73 2696 aaPredicted RBP16.02■□□□□ 0.16
SNX4-204ENST00000473417 ARID1AO14497 2285 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 LIPT2A6NK58 231 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 ZNF814B7Z6K7 855 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 DNPH1O43598 174 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 NPIPB7O75200 414 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 AHSA1O95433 338 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 ZNF682O95780 498 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 SERPINA1P01009 418 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 GPIP06744 558 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 T-ENOLP0DO92 83 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 FOSL1P15407 271 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 GGT1P19440 569 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 CALB2P22676 271 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 EGR4Q05215 589 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 TMEM201Q5SNT2 666 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 ANKRD34AQ69YU3 496 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 GLYATQ6IB77 296 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 ZNF613Q6PF04 617 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 STAC2Q6ZMT1 411 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 DEF8Q6ZN54 512 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 RINLQ6ZS11 566 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 TRPM8Q7Z2W7 1104 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 TSPYL5Q86VY4 417 aaPredicted RBP16.01■□□□□ 0.15
SNX4-204ENST00000473417 RBM15BQ8NDT2 890 aaKnown RBP16.01■□□□□ 0.15
SNX4-204ENST00000473417 WFDC11Q8NEX6 87 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 ADAMTS16Q8TE57 1224 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 LZICQ8WZA0 190 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 SLC38A4Q969I6 547 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 KTI12Q96EK9 354 aaPredicted RBP16.01■□□□□ 0.15
SNX4-204ENST00000473417 ZC3HAV1LQ96H79 300 aaKnown RBP16.01■□□□□ 0.15
SNX4-204ENST00000473417 POM121Q96HA1 1249 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 HS3ST6Q96QI5 342 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 ZNF300Q96RE9 604 aaPredicted RBP16.01■□□□□ 0.15
SNX4-204ENST00000473417 PSD2Q9BQI7 771 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 NAA11Q9BSU3 229 aaPredicted RBP16.01■□□□□ 0.15
SNX4-204ENST00000473417 TAPBPLQ9BX59 468 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 C12orf49Q9H741 205 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 KLHL13Q9P2N7 655 aa16.01■□□□□ 0.15
SNX4-204ENST00000473417 ING1Q9UK53 422 aaPredicted RBP16.01■□□□□ 0.15
SNX4-204ENST00000473417 IGKV1D-42A0A075B6H8 117 aa16■□□□□ 0.15
SNX4-204ENST00000473417 A0A087WUJ7 227 aa16■□□□□ 0.15
SNX4-204ENST00000473417 EIF1BO60739 113 aaKnown RBP16■□□□□ 0.15
SNX4-204ENST00000473417 RAMP1O60894 148 aa16■□□□□ 0.15
SNX4-204ENST00000473417 AKR7A3O95154 331 aa16■□□□□ 0.15
SNX4-204ENST00000473417 THY1P04216 161 aa16■□□□□ 0.15
SNX4-204ENST00000473417 THBDP07204 575 aa16■□□□□ 0.15
SNX4-204ENST00000473417 YES1P07947 543 aa16■□□□□ 0.15
SNX4-204ENST00000473417 PPP3CBP16298 524 aa16■□□□□ 0.15
SNX4-204ENST00000473417 MSX2P35548 267 aaPredicted RBP16■□□□□ 0.15
SNX4-204ENST00000473417 RPS5P46782 204 aaKnown RBP16■□□□□ 0.15
SNX4-204ENST00000473417 SAMD4BQ5PRF9 694 aaKnown RBP16■□□□□ 0.15
SNX4-204ENST00000473417 ABLIM2Q6H8Q1 611 aa16■□□□□ 0.15
SNX4-204ENST00000473417 BEND4Q6ZU67 534 aa16■□□□□ 0.15
SNX4-204ENST00000473417 CBLL1Q75N03 491 aa16■□□□□ 0.15
SNX4-204ENST00000473417 NUFIP2Q7Z417 695 aaKnown RBP16■□□□□ 0.15
SNX4-204ENST00000473417 VTCN1Q7Z7D3 282 aa16■□□□□ 0.15
SNX4-204ENST00000473417 SLC25A36Q96CQ1 311 aa16■□□□□ 0.15
SNX4-204ENST00000473417 PIP5K1AQ99755 562 aa16■□□□□ 0.15
SNX4-204ENST00000473417 BCO1Q9HAY6 547 aa16■□□□□ 0.15
SNX4-204ENST00000473417 FANCFQ9NPI8 374 aa16■□□□□ 0.15
SNX4-204ENST00000473417 CD300AQ9UGN4 299 aa16■□□□□ 0.15
SNX4-204ENST00000473417 ROS1P08922 2347 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 TRAPPC13A5PLN9 417 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 GMNNO75496 209 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 HSD17B1P14061 328 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 H3F3AP84243 136 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 OTUD3Q5T2D3 398 aaPredicted RBP15.99■□□□□ 0.15
SNX4-204ENST00000473417 SWT1Q5T5J6 900 aaKnown RBP15.99■□□□□ 0.15
SNX4-204ENST00000473417 FKBP9P1Q75LS8 142 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 STK32CQ86UX6 486 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 TMEM99Q8N816 258 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 PIGXQ8TBF5 258 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 PTDSS2Q9BVG9 487 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 PCDHAC1Q9H158 963 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 OR10A4Q9H209 315 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 GP6Q9HCN6 339 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 SLC7A7Q9UM01 511 aa15.99■□□□□ 0.15
SNX4-204ENST00000473417 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.98■□□□□ 0.15
SNX4-204ENST00000473417 ZNF716A6NP11 495 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 CHP2O43745 196 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 LYPD3O95274 346 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 PSMB1P20618 241 aaKnown RBP15.98■□□□□ 0.15
SNX4-204ENST00000473417 CBLP22681 906 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 TAS2R41P59536 307 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 NKX6-1P78426 367 aaPredicted RBP15.98■□□□□ 0.15
SNX4-204ENST00000473417 PIN1Q13526 163 aaPredicted RBP15.98■□□□□ 0.15
SNX4-204ENST00000473417 ACKR1Q16570 336 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 PAQR6Q6TCH4 344 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 WDR88Q6ZMY6 472 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 MFSD8Q8NHS3 518 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 PIGTQ969N2 578 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 TAAR8Q969N4 342 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 SLC41A3Q96GZ6 507 aa15.98■□□□□ 0.15
SNX4-204ENST00000473417 HSH2DQ96JZ2 352 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms