RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 A4GNTQ9UNA3 340 aa13.45□□□□□ -0.26
SNX13-205ENST00000471744 ZNF716A6NP11 495 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 DNAJC8O75937 253 aaPredicted RBP13.44□□□□□ -0.26
SNX13-205ENST00000471744 PDE5AO76074 875 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 BGLAPP02818 100 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 RHCEP18577 417 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 UQCRC1P31930 480 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 TRAP1Q12931 704 aaKnown RBP13.44□□□□□ -0.26
SNX13-205ENST00000471744 SLC17A1Q14916 467 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 TRAM2Q15035 370 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 POU4F3Q15319 338 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 WDR88Q6ZMY6 472 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 BEND4Q6ZU67 534 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 H1FNTQ75WM6 255 aaPredicted RBP13.44□□□□□ -0.26
SNX13-205ENST00000471744 CCDC103Q8IW40 242 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 C10orf53Q8N6V4 93 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 ACBD4Q8NC06 268 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 TMEM239Q8WW34 195 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 LRGUKQ96M69 825 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 ZNF300Q96RE9 604 aaPredicted RBP13.44□□□□□ -0.26
SNX13-205ENST00000471744 ENKD1Q9H0I2 346 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 FKRPQ9H9S5 495 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 PARPBPQ9NWS1 579 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 ING1Q9UK53 422 aaPredicted RBP13.44□□□□□ -0.26
SNX13-205ENST00000471744 NOSIPQ9Y314 301 aaKnown RBP13.44□□□□□ -0.26
SNX13-205ENST00000471744 MED31Q9Y3C7 131 aa13.44□□□□□ -0.26
SNX13-205ENST00000471744 ZNF814B7Z6K7 855 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 CNOT4O95628 575 aaKnown RBP13.43□□□□□ -0.26
SNX13-205ENST00000471744 MT-ND1P03886 318 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 COX6B1P14854 86 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 HOXB6P17509 224 aaKnown RBP13.43□□□□□ -0.26
SNX13-205ENST00000471744 IGFBP2P18065 325 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 KLK2P20151 261 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 GRNP28799 593 aaKnown RBP13.43□□□□□ -0.26
SNX13-205ENST00000471744 GRPRP30550 384 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 CD79BP40259 229 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 P2RY4P51582 365 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 SMIM11AP58511 58 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 CYP2R1Q6VVX0 501 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 ALPK2Q86TB3 2170 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 P3H2Q8IVL5 708 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 NKAIN4Q8IVV8 208 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 OR9K2Q8NGE7 335 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 CCDC124Q96CT7 223 aaKnown RBP13.43□□□□□ -0.26
SNX13-205ENST00000471744 C7orf34Q96L11 122 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 OXGR1Q96P68 337 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 OPN3Q9H1Y3 402 aaPredicted RBP13.43□□□□□ -0.26
SNX13-205ENST00000471744 MMADHCQ9H3L0 296 aaPredicted RBP13.43□□□□□ -0.26
SNX13-205ENST00000471744 NPDC1Q9NQX5 325 aaPredicted RBP13.43□□□□□ -0.26
SNX13-205ENST00000471744 GALNT8Q9NY28 637 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 MRPL39Q9NYK5 338 aaKnown RBP13.43□□□□□ -0.26
SNX13-205ENST00000471744 NDUFAF4Q9P032 175 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 FLVCR1Q9Y5Y0 555 aa13.43□□□□□ -0.26
SNX13-205ENST00000471744 LOC102725191A0A1B0GVB3 256 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 C19orf84I3L1E1 186 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 M0R082 166 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 HNRNPRO43390 633 aaKnown RBP13.42□□□□□ -0.26
SNX13-205ENST00000471744 RAMP1O60894 148 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 MRPL33O75394 65 aaKnown RBP13.42□□□□□ -0.26
SNX13-205ENST00000471744 SEMG1P04279 462 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 HIST1H2ABP04908 130 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 FABP3P05413 133 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 POU2F1P14859 743 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 NQO1P15559 274 aaKnown RBP13.42□□□□□ -0.26
SNX13-205ENST00000471744 ATP6V1B2P21281 511 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 YAP1P46937 504 aaKnown RBP13.42□□□□□ -0.26
SNX13-205ENST00000471744 OR3A2P47893 321 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 ZNF74Q16587 644 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 PGM2L1Q6PCE3 622 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 ZNF474Q6S9Z5 364 aaPredicted RBP13.42□□□□□ -0.26
SNX13-205ENST00000471744 TFAP2EQ6VUC0 442 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 MEX3BQ6ZN04 569 aaKnown RBP13.42□□□□□ -0.26
SNX13-205ENST00000471744 HIST3H2AQ7L7L0 130 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 NUFIP2Q7Z417 695 aaKnown RBP13.42□□□□□ -0.26
SNX13-205ENST00000471744 GPAT4Q86UL3 456 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 DMRTC2Q8IXT2 367 aaPredicted RBP13.42□□□□□ -0.26
SNX13-205ENST00000471744 ZNF100Q8IYN0 542 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 RNF113BQ8IZP6 322 aaKnown RBP13.42□□□□□ -0.26
SNX13-205ENST00000471744 FAM86B1Q8N7N1 296 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 ZNF610Q8N9Z0 462 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 PIK3C3Q8NEB9 887 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 OR5J2Q8NH18 312 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 ZNF417Q8TAU3 575 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 TMEM255BQ8WV15 326 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 HIST1H2ACQ93077 130 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 TMEM45BQ96B21 275 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 APH1AQ96BI3 265 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 CLPTM1LQ96KA5 538 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 ZNF587Q96SQ5 575 aaPredicted RBP13.42□□□□□ -0.26
SNX13-205ENST00000471744 MAGIXQ9H6Y5 334 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 C12orf49Q9H741 205 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 IL1RAPQ9NPH3 570 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 NANSQ9NR45 359 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 ZNF229Q9UJW7 825 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 V9GYQ6 96 aa13.42□□□□□ -0.26
SNX13-205ENST00000471744 A0A1W2PRQ8 180 aa13.41□□□□□ -0.26
SNX13-205ENST00000471744 J3KTA2 159 aa13.41□□□□□ -0.26
SNX13-205ENST00000471744 EBAG9O00559 213 aa13.41□□□□□ -0.26
SNX13-205ENST00000471744 KPNA4O00629 521 aaPredicted RBP13.41□□□□□ -0.26
SNX13-205ENST00000471744 FFAR1O14842 300 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms