RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 IGLL1P15814 213 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 GATA1P15976 413 aaPredicted RBP5.12□□□□□ -1.59
SMC5-202ENST00000471372 GTF2E2P29084 291 aaKnown RBP5.12□□□□□ -1.59
SMC5-202ENST00000471372 PRDX3P30048 256 aaKnown RBP5.12□□□□□ -1.59
SMC5-202ENST00000471372 CASQ1P31415 396 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 LIPEQ05469 1076 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 CCDC173Q0VFZ6 552 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 DNAJC3Q13217 504 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 ASAH1Q13510 395 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 SAMD4BQ5PRF9 694 aaKnown RBP5.12□□□□□ -1.59
SMC5-202ENST00000471372 ZNF836Q6ZNA1 936 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 C17orf82Q86X59 251 aaPredicted RBP5.12□□□□□ -1.59
SMC5-202ENST00000471372 SKA3Q8IX90 412 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 OR13F1Q8NGS4 319 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 GPR151Q8TDV0 419 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 GLYATL2Q8WU03 294 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 PAGE5Q96GU1 130 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 ATP5SQ99766 215 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 VGLL1Q99990 258 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 RIOK1Q9BRS2 568 aaKnown RBP5.12□□□□□ -1.59
SMC5-202ENST00000471372 UGT1A10Q9HAW8 530 aa5.12□□□□□ -1.59
SMC5-202ENST00000471372 PEF1Q9UBV8 284 aaKnown RBP5.12□□□□□ -1.59
SMC5-202ENST00000471372 NSG1A0A0A6YYJ2 146 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 A0A0G2JRQ6 117 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 LINC01565O15544 149 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 GPAA1O43292 621 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 IGKV3-20P01619 116 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 IGHV3-13P01766 116 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 SHMT2P34897 504 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 NSG1P42857 185 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 UQCRFS1P47985 274 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 PLK1P53350 603 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 CXCL6P80162 114 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 PAX5Q02548 391 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 SELENBP1Q13228 472 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 ITIH4Q14624 930 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 PLCXD3Q63HM9 321 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 TWF2Q6IBS0 349 aaKnown RBP5.11□□□□□ -1.59
SMC5-202ENST00000471372 ZNF497Q6ZNH5 498 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 WDSUB1Q8N9V3 476 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 MARCH1Q8TCQ1 289 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 GPX8Q8TED1 209 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 PYROXD1Q8WU10 500 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 OR5M11Q96RB7 305 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 SLC29A1Q99808 456 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 OR51M1Q9H341 326 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 ELOVL6Q9H5J4 265 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 RNF167Q9H6Y7 350 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 FOLH1BQ9HBA9 442 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 CLEC5AQ9NY25 188 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 UBQLN1Q9UMX0 589 aaKnown RBP5.11□□□□□ -1.59
SMC5-202ENST00000471372 GON4LQ3T8J9 2241 aa5.11□□□□□ -1.59
SMC5-202ENST00000471372 IGLV3-22A0A075B6J6 115 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 IGHV3-35A0A0C4DH35 117 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 LOC110117498-PIK3R3F6TDL0 507 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 PI15O43692 258 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 OTCP00480 354 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 ATP6V1B2P21281 511 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 STOMP27105 288 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 RRM2P31350 389 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 TNNT2P45379 298 aaPredicted RBP5.1□□□□□ -1.59
SMC5-202ENST00000471372 YAP1P46937 504 aaKnown RBP5.1□□□□□ -1.59
SMC5-202ENST00000471372 AANATQ16613 207 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 PAN3Q58A45 887 aaKnown RBP5.1□□□□□ -1.59
SMC5-202ENST00000471372 SOHLH1Q5JUK2 328 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 SLC16A14Q7RTX9 510 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 MICU2Q8IYU8 434 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 FTMTQ8N4E7 242 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 OR4A4PQ8NGN8 299 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 SGK3Q96BR1 496 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 SOSTQ9BQB4 213 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 TMEM59Q9BXS4 323 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 ACTR6Q9GZN1 396 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 BLZF1Q9H2G9 400 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 LYRM4Q9HD34 91 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 MRPS30Q9NP92 439 aaKnown RBP5.1□□□□□ -1.59
SMC5-202ENST00000471372 CCNB1IP1Q9NPC3 277 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.1□□□□□ -1.59
SMC5-202ENST00000471372 LYARQ9NX58 379 aaKnown RBP5.1□□□□□ -1.59
SMC5-202ENST00000471372 ZNF581Q9P0T4 197 aa5.1□□□□□ -1.59
SMC5-202ENST00000471372 E9PQ18 207 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 K7N7A8 449 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 PPP1R2P9O14990 202 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 TBX6O95947 436 aaPredicted RBP5.09□□□□□ -1.59
SMC5-202ENST00000471372 CPN2P22792 545 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 DCKP27707 260 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 AQP1P29972 269 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 TMED10P49755 219 aaKnown RBP5.09□□□□□ -1.59
SMC5-202ENST00000471372 ETV1P50549 477 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 GPM6AP51674 278 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 RAB10P61026 200 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 MRPS22P82650 360 aaKnown RBP5.09□□□□□ -1.59
SMC5-202ENST00000471372 CD47Q08722 323 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 IFT88Q13099 833 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 ARL6IP1Q15041 203 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 KLF17Q5JT82 389 aaPredicted RBP5.09□□□□□ -1.59
SMC5-202ENST00000471372 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 C9orf135Q5VTT2 229 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 SLC26A11Q86WA9 606 aa5.09□□□□□ -1.59
SMC5-202ENST00000471372 PIANPQ8IYJ0 282 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms