RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 HSPA12BQ96MM6 686 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 MRI1Q9BV20 369 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 IGFLR1Q9H665 355 aa12.49□□□□□ -0.41
BRCA1-209ENST00000470026 AKAP7Q9P0M2 348 aaPredicted RBP12.49□□□□□ -0.41
BRCA1-209ENST00000470026 NUP210LQ5VU65 1888 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 EML5Q05BV3 1969 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 BLACEA4D250 179 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 NAP1L6A6NFF2 107 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 PRR32B1ATL7 298 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 IMPA2O14732 288 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 KHNYNO15037 678 aaKnown RBP12.48□□□□□ -0.41
BRCA1-209ENST00000470026 PEX14O75381 377 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 CTSBP07858 339 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 APEHP13798 732 aaKnown RBP12.48□□□□□ -0.41
BRCA1-209ENST00000470026 AKT2P31751 481 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 PSMB10P40306 273 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 ZP1P60852 638 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 PRPS1P60891 318 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 RPL6Q02878 288 aaKnown RBP12.48□□□□□ -0.41
BRCA1-209ENST00000470026 RIPPLY1Q0D2K3 151 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.48□□□□□ -0.41
BRCA1-209ENST00000470026 FAM209AQ5JX71 171 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 Q6ZSR6 202 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 SFTPA2Q8IWL1 248 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 OR11G2Q8NGC1 345 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 OR8H1Q8NGG4 311 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 SLC37A2Q8TED4 501 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 SPACA7Q96KW9 195 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 CITED4Q96RK1 184 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 CCDC3Q9BQI4 270 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 C20orf85Q9H1P6 137 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 SEMA6CQ9H3T2 930 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 CAPN10Q9HC96 672 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 HRASLSQ9HDD0 168 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 Q9N2J8 555 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 SCP2D1Q9UJQ7 156 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 POMT2Q9UKY4 750 aa12.48□□□□□ -0.41
BRCA1-209ENST00000470026 YBX2Q9Y2T7 364 aaKnown RBP12.48□□□□□ -0.41
BRCA1-209ENST00000470026 LINC01565O15544 149 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 NDUFB5O43674 189 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 GMDSO60547 372 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 PRAMEF2O60811 474 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 PRAF2O60831 178 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 ECDO95905 644 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 TNFP01375 233 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 ST6GAL1P15907 406 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 POU3F3P20264 500 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 RPL4P36578 427 aaKnown RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 NANOS3P60323 173 aaKnown RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 FUT7Q11130 342 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 NDUFAF6Q330K2 333 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 LGALSLQ3ZCW2 172 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 SLC6A19Q695T7 634 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 DNM1P46Q6ZS02 220 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 FAM122BQ7Z309 247 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF440Q8IYI8 595 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 SLC22A18ASQ8N1D0 253 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 OR4C3Q8NH37 302 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 RASD2Q96D21 266 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 RBM18Q96H35 190 aaKnown RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 MAP6Q96JE9 813 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 LRIT1Q9P2V4 623 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 FBXL3Q9UKT7 428 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 HIF3AQ9Y2N7 669 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 TPPPO94811 219 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 ZFPL1O95159 310 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 CSTAP01040 98 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 HPXP02790 462 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 SYPP08247 313 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 CALCBP10092 127 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 RNH1P13489 461 aaKnown RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 ADH7P40394 386 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 PTH2RP49190 550 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 TPMTP51580 245 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 ARPC4P59998 168 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 MRPS10P82664 201 aaKnown RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 TFF2Q03403 129 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 KLHL26Q53HC5 615 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 FNDC7Q5VTL7 733 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 OLFML2AQ68BL7 652 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 KCTD20Q7Z5Y7 419 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 OOSP2Q86WS3 158 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF595Q8IYB9 648 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 IZUMO1Q8IYV9 350 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 BCORP1Q8N888 145 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 ZSCAN1Q8NBB4 408 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 OIT3Q8WWZ8 545 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 ZNF578Q96N58 590 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 UTP23Q9BRU9 249 aaKnown RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 ALG12Q9BV10 488 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 TCEAL2Q9H3H9 227 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 NPDC1Q9NQX5 325 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 EIF3KQ9UBQ5 218 aaKnown RBP12.47□□□□□ -0.41
BRCA1-209ENST00000470026 V9GY05 133 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 CACNA1IQ9P0X4 2223 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 HEATR5AQ86XA9 2040 aa12.47□□□□□ -0.41
BRCA1-209ENST00000470026 A0A1B0GUH1 482 aa12.46□□□□□ -0.41
BRCA1-209ENST00000470026 ACOD1A6NK06 481 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms