RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 AMBRA1Q9C0C7 1298 aa16.08■□□□□ 0.16
PHGDH-204ENST00000469443 SLCO5A1Q9H2Y9 848 aa16.08■□□□□ 0.16
PHGDH-204ENST00000469443 KAT8Q9H7Z6 458 aaKnown RBP16.08■□□□□ 0.16
PHGDH-204ENST00000469443 TMEM27Q9HBJ8 222 aa16.08■□□□□ 0.16
PHGDH-204ENST00000469443 NPAP1Q9NZP6 1156 aa16.08■□□□□ 0.16
PHGDH-204ENST00000469443 SLC25A15Q9Y619 301 aa16.08■□□□□ 0.16
PHGDH-204ENST00000469443 FBP2O00757 339 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 OR2T1O43869 369 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 FZD7O75084 574 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 VIMP08670 466 aaKnown RBP16.07■□□□□ 0.16
PHGDH-204ENST00000469443 PTH2RP49190 550 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 TRMT5Q32P41 509 aaKnown RBP16.07■□□□□ 0.16
PHGDH-204ENST00000469443 ZNF672Q499Z4 452 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-204ENST00000469443 HSP90B2PQ58FF3 399 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 CGB2Q6NT52 195 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 PRSS57Q6UWY2 283 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 CREB3L2Q70SY1 520 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 SLC30A8Q8IWU4 369 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 POMGNT2Q8NAT1 580 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 SMYD1Q8NB12 490 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 KBTBD8Q8NFY9 601 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 OR52N5Q8NH56 324 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 SLC38A4Q969I6 547 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 SLC47A1Q96FL8 570 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 CXorf56Q9H5V9 222 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 SELENONQ9NZV5 590 aa16.07■□□□□ 0.16
PHGDH-204ENST00000469443 IGKV1D-42A0A075B6H8 117 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 M0QX08 132 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 TPST2O60704 377 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 PAX1P15863 534 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 MPGP29372 298 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 PCGF2P35227 344 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 TGFBR3Q03167 851 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 SF3A3Q12874 501 aaKnown RBP eCLIP16.06■□□□□ 0.16
PHGDH-204ENST00000469443 KLF10Q13118 480 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 OR1Q1Q15612 314 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 FAM69AQ5T7M9 428 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 C9orf135Q5VTT2 229 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 RANBP3LQ86VV4 465 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-204ENST00000469443 EPHX4Q8IUS5 362 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 C17orf78Q8N4C9 275 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 OR10A6Q8NH74 314 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 NEUROG1Q92886 237 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 TAAR8Q969N4 342 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 WFDC6Q9BQY6 131 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 CCDC134Q9H6E4 229 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 ZNF701Q9NV72 531 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-204ENST00000469443 LAMP3Q9UQV4 416 aa16.06■□□□□ 0.16
PHGDH-204ENST00000469443 ZFHX3Q15911 3703 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 ALPK2Q86TB3 2170 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 TRAV36DV7A0A075B6V5 113 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 A0A087WUJ7 227 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 A0A0B4J2E0 115 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 A0A1B0GX12 115 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 A0A1W2PR80 420 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 LGI1O95970 557 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 OPN1SWP03999 348 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 C8BP07358 591 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 RPS4XP62701 263 aaKnown RBP16.05■□□□□ 0.16
PHGDH-204ENST00000469443 GUCY1A3Q02108 690 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 CYLC2Q14093 348 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-204ENST00000469443 MAPRE2Q15555 327 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 DUSP7Q16829 419 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 MMEL1Q495T6 779 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 COQ5Q5HYK3 327 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 INTS11Q5TA45 600 aaKnown RBP16.05■□□□□ 0.16
PHGDH-204ENST00000469443 NANOGP8Q6NSW7 305 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 TMEM108Q6UXF1 575 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 ABHD12BQ7Z5M8 362 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-204ENST00000469443 YTHDF3Q7Z739 585 aaKnown RBP16.05■□□□□ 0.16
PHGDH-204ENST00000469443 PATL1Q86TB9 770 aaKnown RBP16.05■□□□□ 0.16
PHGDH-204ENST00000469443 WDR31Q8NA23 367 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 RNF217Q8TC41 542 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 ARHGDIGQ99819 225 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 NANOGQ9H9S0 305 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 MED4Q9NPJ6 270 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 SAR1AQ9NR31 198 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 SLC17A5Q9NRA2 495 aa16.05■□□□□ 0.16
PHGDH-204ENST00000469443 OR6C65A6NJZ3 312 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 BBIP1A8MTZ0 92 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 SHISA9B4DS77 424 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 M0R082 166 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 M0R3H8 397 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 FXYD1O00168 92 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 ABCD4O14678 606 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 AIM2O14862 343 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 FMO6PO60774 539 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 KRT33AO76009 404 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 DANCRP0C864 163 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 ZNF43P17038 809 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 PTAFRP25105 342 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 SELENOPP49908 381 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 GZMMP51124 257 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 ZNF83P51522 516 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 MFSD13AQ14CX5 517 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 NRF1Q16656 503 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 VMACQ2NL98 169 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 SWT1Q5T5J6 900 aaKnown RBP16.04■□□□□ 0.16
PHGDH-204ENST00000469443 C1QTNF12Q5T7M4 302 aa16.04■□□□□ 0.16
PHGDH-204ENST00000469443 NIPAL3Q6P499 406 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms