RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 RAET1LQ5VY80 246 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 SLC6A19Q695T7 634 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 GRINAQ7Z429 371 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ATG4DQ86TL0 474 aaPredicted RBP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 YRDCQ86U90 279 aaKnown RBP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 HS3ST5Q8IZT8 346 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 TMEM251Q8N6I4 163 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 FAM98AQ8NCA5 519 aaKnown RBP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 FAM83FQ8NEG4 500 aaPredicted RBP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 TMEM255BQ8WV15 326 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 NR4A3Q92570 626 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 HDAC2Q92769 488 aaKnown RBP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 SLC38A4Q969I6 547 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 LUZP4Q9P127 313 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 B4GALT7Q9UBV7 327 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 OAZ3Q9UMX2 235 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 LHX6Q9UPM6 363 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF175Q9Y473 711 aa6.21□□□□□ -1.42
SCAF4-204ENST00000467731 MAGED1Q9Y5V3 778 aaPredicted RBP6.21□□□□□ -1.42
SCAF4-204ENST00000467731 ZGRF1Q86YA3 2104 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 A0A087WUJ7 227 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 A0A087WUU8 490 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 H3BSA7 217 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 RASAL1O95294 804 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 CELA3AP09093 270 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 THRBP10828 461 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 SELLP14151 372 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 HK1P19367 917 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 DNAJA1P31689 397 aaKnown RBP6.2□□□□□ -1.42
SCAF4-204ENST00000467731 LIMS1P48059 325 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 HMGA2P52926 109 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 TRAM2Q15035 370 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 SEC23BQ15437 767 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 ST3GAL2Q16842 350 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 HYAL4Q2M3T9 481 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 PLEKHN1Q494U1 663 aaPredicted RBP6.2□□□□□ -1.42
SCAF4-204ENST00000467731 DCST1Q5T197 706 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 SLC22A16Q86VW1 577 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 GALNT4Q8N4A0 578 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 POC1BQ8TC44 478 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 ZBTB8AQ96BR9 441 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 MRGPRX4Q96LA9 322 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 UBL7Q96S82 380 aaPredicted RBP6.2□□□□□ -1.42
SCAF4-204ENST00000467731 EPYCQ99645 322 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 BARD1Q99728 777 aaKnown RBP6.2□□□□□ -1.42
SCAF4-204ENST00000467731 KIAA1549Q9HCM3 1950 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 A0A087WZY1 265 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 SAC3D1A6NKF1 404 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 ELOA3DA6NLF2 546 aaPredicted RBP6.2□□□□□ -1.42
SCAF4-204ENST00000467731 ACOT7O00154 380 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 SSX5O60225 188 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 RAC2P15153 192 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 CCNA2P20248 432 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 IL11P20809 199 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 NR4A1P22736 598 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 CXCR1P25024 350 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 HTR3AP46098 478 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 POLR2HP52434 150 aaKnown RBP6.2□□□□□ -1.42
SCAF4-204ENST00000467731 DLX5P56178 289 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 SMIM11AP58511 58 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 PPIAP62937 165 aaKnown RBP6.2□□□□□ -1.42
SCAF4-204ENST00000467731 OXA1LQ15070 435 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 LRRC36Q1X8D7 754 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 ELOA3BQ3SY89 546 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 SLC25A53Q5H9E4 307 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 OR7E24Q6IFN5 339 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 PODNL1Q6PEZ8 512 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 TBPL2Q6SJ96 375 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 LINC00114Q6XXX2 140 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 ADGRG3Q86Y34 549 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 EPHX4Q8IUS5 362 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 P3H2Q8IVL5 708 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 DEPDC4Q8N2C3 294 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 EXD3Q8N9H8 876 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 ELOA3Q8NG57 546 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 OR4C15Q8NGM1 316 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 OR14L1PQ8NHC6 308 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 RELTQ969Z4 430 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 TAAR6Q96RI8 345 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 FUZQ9BT04 418 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 ZNF426Q9BUY5 554 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 GON7Q9BXV9 100 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 ANKRD19PQ9H560 264 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 REV1Q9UBZ9 1251 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 CHRNA9Q9UGM1 479 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.2□□□□□ -1.426e-8■□□□□ 9.9
SCAF4-204ENST00000467731 COL6A6A6NMZ7 2263 aa6.2□□□□□ -1.42
SCAF4-204ENST00000467731 NBASA2RRP1 2371 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TMED7-TICAM2A0A0A6YYA0 188 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 OR2M5A3KFT3 312 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 PRSS44E7EML9 344 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 H3BML4 177 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 TFECO14948 347 aaPredicted RBP6.19□□□□□ -1.42
SCAF4-204ENST00000467731 EFNA2O43921 213 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 HPNP05981 417 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 PNMTP11086 282 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 PEPDP12955 493 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 FPR1P21462 350 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 PRKACGP22612 351 aa6.19□□□□□ -1.42
SCAF4-204ENST00000467731 PEX2P28328 305 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms