RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TBC1D3KA0A087X1G2 549 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 TBC1D3FA6NER0 549 aaPredicted RBP16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 TBC1D3LB9A6J9 549 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 DNAJB6O75190 326 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 HEXAP06865 529 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 TBC1D3HP0C7X1 549 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 MC3RP41968 323 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 CDH11P55287 796 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 TBC1D3GQ6DHY5 549 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 TBC1D3CQ6IPX1 549 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 FBXO46Q6PJ61 603 aaPredicted RBP16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 VRK2Q86Y07 508 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 OR4N5Q8IXE1 308 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 TBC1D3Q8IZP1 549 aaPredicted RBP16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 CCL4L1Q8NHW4 92 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 PHOSPHO1Q8TCT1 267 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 ARSGQ96EG1 525 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 TMEM41AQ96HV5 264 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 CACYBPQ9HB71 228 aaKnown RBP16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 UFSP2Q9NUQ7 469 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 RCE1Q9Y256 329 aa16.63■□□□□ 0.25
SNAPC3-205ENST00000467062 POM121BA6NF01 834 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 C5orf52A6NGY3 159 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 LINC01565O15544 149 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 CLEC3AO75596 197 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 SAGP10523 405 aaPredicted RBP16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 PDZK1IP1Q13113 114 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 TMEM44Q2T9K0 475 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 ABHD17CQ6PCB6 329 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 ZNF322Q6U7Q0 402 aaPredicted RBP16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 YAF2Q8IY57 180 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 LINC00471Q8N535 108 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 OR4F15Q8NGB8 312 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 THEM6Q8WUY1 208 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 FGF22Q9HCT0 170 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 PHPT1Q9NRX4 125 aaPredicted RBP16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 ACSS1Q9NUB1 689 aaPredicted RBP16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 CNIH4Q9P003 139 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 APOBEC3BQ9UH17 382 aaKnown RBP16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 RPH3AQ9Y2J0 694 aaPredicted RBP16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 MEX3AA1L020 520 aaKnown RBP16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 UBE2QL1A1L167 161 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 TRAPPC13A5PLN9 417 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 FCMRO60667 390 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 UBE2IP63279 158 aaKnown RBP16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 OR2L3Q8NG85 312 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 ARMC5Q96C12 935 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 GINS4Q9BRT9 223 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 SLC17A9Q9BYT1 436 aa16.62■□□□□ 0.25
SNAPC3-205ENST00000467062 CH25HO95992 272 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 FOLR2P14207 255 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 FPR3P25089 353 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 PPP2R1BP30154 601 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 NTSP30990 170 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 RAB42Q8N4Z0 105 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 WDSUB1Q8N9V3 476 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 SMAP2Q8WU79 429 aaPredicted RBP16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 C8orf33Q9H7E9 229 aaPredicted RBP16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 ABRACLQ9P1F3 81 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 NPFFR2Q9Y5X5 522 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 A0A0G2JK05 382 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 OR6C74A6NCV1 312 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 CPSF4LA6NMK7 179 aaKnown RBP16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 F5H5P2 479 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 HYAL3O43820 417 aaPredicted RBP16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 KHDRBS3O75525 346 aaKnown RBP16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 AKR7A3O95154 331 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 GSTM3P21266 225 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 IGFALSP35858 605 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 BTN3A2P78410 334 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 TEX30Q5JUR7 227 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 PRSS45Q7RTY3 260 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 TMEFF1Q8IYR6 380 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 POLE3Q9NRF9 147 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 MRPL15Q9P015 296 aaKnown RBP16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 TBC1D29Q9UFV1 150 aa16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.61■□□□□ 0.25
SNAPC3-205ENST00000467062 REM1O75628 298 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 IGHA1P01876 353 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 ASGR2P07307 311 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 ATP6V1E1P36543 226 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 RPE65Q16518 533 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 FAM76BQ5HYJ3 339 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 SLC6A19Q695T7 634 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 CXXC5Q7LFL8 322 aaKnown RBP16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 PHOSPHO2Q8TCD6 241 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 UTP23Q9BRU9 249 aaKnown RBP16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 AUNIPQ9H7T9 357 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 PLEKHA1Q9HB21 404 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 ZNF629Q9UEG4 869 aaPredicted RBP16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 EXOGQ9Y2C4 368 aaKnown RBP16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 CARHSP1Q9Y2V2 147 aaKnown RBP16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 CACNB4O00305 520 aaPredicted RBP16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 TBX19O60806 448 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 CBR1P16152 277 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 PPP2CBP62714 309 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 PPP2CAP67775 309 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 TRAM1Q15629 374 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 SLC25A35Q3KQZ1 300 aa16.6■□□□□ 0.25
SNAPC3-205ENST00000467062 MTFR2Q6P444 385 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms