RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 PIGXQ8TBF5 258 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 BRIX1Q8TDN6 353 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 TMEM239Q8WW34 195 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 TRUB1Q8WWH5 349 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 DVL3Q92997 716 aaPredicted RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 C3orf49Q96BT1 292 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 RNF31Q96EP0 1072 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 NAF1Q96HR8 494 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 THOC3Q96J01 351 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 MRGPRX4Q96LA9 322 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 OR14A2Q96R54 314 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 PITX2Q99697 317 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 ADI1Q9BV57 179 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 SCNM1Q9BWG6 230 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 KRTAP4-5Q9BYR2 181 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 POTEKPQ9BYX7 375 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 ANKRD60Q9BZ19 345 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 UCK2Q9BZX2 261 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 OR10A2Q9H208 303 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 PTGES2Q9H7Z7 377 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 LIN28AQ9H9Z2 209 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 ZNF556Q9HAH1 456 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 SMURF2Q9HAU4 748 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 FAM118AQ9NWS6 357 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 QPCTLQ9NXS2 382 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 TAS2R10Q9NYW0 307 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 IL20Q9NYY1 176 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 SELENONQ9NZV5 590 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 RPS6KB2Q9UBS0 482 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 KLK13Q9UKR3 277 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 NDRG4Q9ULP0 352 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 CARD8Q9Y2G2 431 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 MED31Q9Y3C7 131 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 ORC6Q9Y5N6 252 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 MAGED1Q9Y5V3 778 aaPredicted RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 WIF1Q9Y5W5 379 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 MRPS18BQ9Y676 258 aaKnown RBP4.96□□□□□ -1.62
VPS41-211ENST00000466017 U3KQV3 271 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 DOCK10Q96BY6 2186 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 EXPH5Q8NEV8 1989 aa4.96□□□□□ -1.62
VPS41-211ENST00000466017 PCSK5Q92824 1860 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 LOC100130705A0A1B0GUX0 176 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 ZAR1LA6NP61 321 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 NKX2-8O15522 239 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 FRS3O43559 492 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 HCRTR2O43614 444 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 OR2T1O43869 369 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 OR10H3O60404 316 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 MPZL2O60487 215 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 NPIPB7O75200 414 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 TRIM3O75382 744 aaPredicted RBP4.95□□□□□ -1.62
VPS41-211ENST00000466017 NEURL1O76050 574 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 RCBTB2O95199 551 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 SNAP29O95721 258 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 GP1BBP13224 206 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 TNFRSF1AP19438 455 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 MYF6P23409 242 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 CASRP41180 1078 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 POLR2HP52434 150 aaKnown RBP4.95□□□□□ -1.62
VPS41-211ENST00000466017 CRISP1P54107 249 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 UGT2B15P54855 530 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 DSCR4P56555 118 aaPredicted RBP4.95□□□□□ -1.62
VPS41-211ENST00000466017 CSNK2BP67870 215 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 DGCR2P98153 550 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 EFNB1P98172 346 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 ROM1Q03395 351 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 CDC20Q12834 499 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 PPP1R8Q12972 351 aaKnown RBP4.95□□□□□ -1.62
VPS41-211ENST00000466017 MFSD13AQ14CX5 517 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 PDCD1Q15116 288 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 SEC23BQ15437 767 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 TAF11Q15544 211 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 ZNF239Q16600 458 aaKnown RBP4.95□□□□□ -1.62
VPS41-211ENST00000466017 TMEM44Q2T9K0 475 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 COL28A1Q2UY09 1125 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 ZMAT1Q5H9K5 638 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 FGD3Q5JSP0 725 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 SLC25A30Q5SVS4 291 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 AGAP7PQ5VUJ5 663 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 TIGD3Q6B0B8 471 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 KLHL17Q6TDP4 642 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 ZNF730Q6ZMV8 503 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 HMGN2P46Q86SG4 172 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 ADGRG3Q86Y34 549 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 THNSL2Q86YJ6 484 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 CHERPQ8IWX8 916 aaKnown RBP4.95□□□□□ -1.62
VPS41-211ENST00000466017 HS3ST5Q8IZT8 346 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 ZNF808Q8N4W9 903 aaPredicted RBP4.95□□□□□ -1.62
VPS41-211ENST00000466017 AMER2Q8N7J2 671 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 WDSUB1Q8N9V3 476 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 AQP11Q8NBQ7 271 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 MDS2Q8NDY4 140 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 ZNF555Q8NEP9 628 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 OR52J3Q8NH60 311 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 ZNF563Q8TA94 476 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 SNRNP27Q8WVK2 155 aaKnown RBP4.95□□□□□ -1.62
VPS41-211ENST00000466017 KCNE4Q8WWG9 221 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 EXTL1Q92935 676 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 SCMH1Q96GD3 660 aa4.95□□□□□ -1.62
VPS41-211ENST00000466017 AGAP4Q96P64 663 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms