RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 NCF2P19878 526 aaPredicted RBP11.21□□□□□ -0.61
SRM-203ENST00000465788 PTNP21246 168 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 USF1P22415 310 aaPredicted RBP11.21□□□□□ -0.61
SRM-203ENST00000465788 UBE2NP61088 152 aaKnown RBP11.21□□□□□ -0.61
SRM-203ENST00000465788 GUCY1A3Q02108 690 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 PDCD4Q53EL6 469 aaKnown RBP11.21□□□□□ -0.61
SRM-203ENST00000465788 C9orf135Q5VTT2 229 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 C5orf46Q6UWT4 87 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 HMGN2P46Q86SG4 172 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 GPAT4Q86UL3 456 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 ZNF525Q8N782 197 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 TMEM99Q8N816 258 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 FAM169BQ8N8A8 192 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 ZNF540Q8NDQ6 660 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 ANKK1Q8NFD2 765 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 MAGEE2Q8TD90 523 aaPredicted RBP11.21□□□□□ -0.61
SRM-203ENST00000465788 STK35Q8TDR2 534 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 DNAJA3Q96EY1 480 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 C1QTNF6Q9BXI9 259 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 BEX2Q9BXY8 128 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 RAD21L1Q9H4I0 556 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 PNPOQ9NVS9 261 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 GPR45Q9Y5Y3 372 aa11.21□□□□□ -0.61
SRM-203ENST00000465788 ARPC4-TTLL3A0A0A6YYG9 625 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 A0A0G2JPF8 293 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 ZC3H12DA2A288 527 aaKnown RBP11.2□□□□□ -0.62
SRM-203ENST00000465788 HNRNPCL2B2RXH8 293 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 HNRNPCL3B7ZW38 293 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 HNRNPCL1O60812 293 aaKnown RBP11.2□□□□□ -0.62
SRM-203ENST00000465788 SLC22A3O75751 556 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 AKR7A3O95154 331 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 AHSA1O95433 338 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 ERCC1P07992 297 aaPredicted RBP11.2□□□□□ -0.62
SRM-203ENST00000465788 TFPTP0C1Z6 253 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 HNRNPCL4P0DMR1 293 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 GTF2E2P29084 291 aaKnown RBP11.2□□□□□ -0.62
SRM-203ENST00000465788 CRATP43155 626 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 FOXG1P55316 489 aaPredicted RBP11.2□□□□□ -0.62
SRM-203ENST00000465788 NME5P56597 212 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 DSTNP60981 165 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 LSM11P83369 360 aaKnown RBP eCLIP11.2□□□□□ -0.62
SRM-203ENST00000465788 C1orf140Q5VVS0 124 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 PRAMEF8Q5VWM4 474 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 PRAMEF7Q5VXH5 474 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 CADM2Q8N3J6 435 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 ZIC4Q8N9L1 334 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 OR4F15Q8NGB8 312 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 AURKBQ96GD4 344 aaPredicted RBP11.2□□□□□ -0.62
SRM-203ENST00000465788 ITCHQ96J02 903 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 TEX37Q96LM6 180 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 SLC38A2Q96QD8 506 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 PIMREGQ9BSJ6 248 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 SPATA9Q9BWV2 254 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 LINC00470Q9BZP3 86 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 SHARPINQ9H0F6 387 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 ZIM2Q9NZV7 527 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 RCE1Q9Y256 329 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 ZNF443Q9Y2A4 671 aaPredicted RBP11.2□□□□□ -0.62
SRM-203ENST00000465788 MALRD1Q5VYJ5 2156 aa11.2□□□□□ -0.62
SRM-203ENST00000465788 FBN1P35555 2871 aaKnown RBP11.19□□□□□ -0.62
SRM-203ENST00000465788 LOC390937A0A1W2PQ73 354 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 B9A039 149 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 ATP6V1G2-DDX39BF2Z307 99 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 FRS3O43559 492 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 AKAP8O43823 692 aaKnown RBP11.19□□□□□ -0.62
SRM-203ENST00000465788 GPRIN2O60269 458 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 BCHEP06276 602 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 GSNP06396 782 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 HNF1AP20823 631 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 EPHA3P29320 983 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 IL12AP29459 219 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 ACAA2P42765 397 aaKnown RBP11.19□□□□□ -0.62
SRM-203ENST00000465788 CDKN2CP42773 168 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 SLC25A3Q00325 362 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 SWI5Q1ZZU3 235 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 TBRG1Q3YBR2 411 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 COX20Q5RI15 118 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 NXNQ6DKJ4 435 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 ANKRD16Q6P6B7 361 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 ZNF836Q6ZNA1 936 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 CCDC36Q8IYA8 594 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 OR1K1Q8NGR3 316 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 MFSD8Q8NHS3 518 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 PNPT1Q8TCS8 783 aaKnown RBP11.19□□□□□ -0.62
SRM-203ENST00000465788 FBXO17Q96EF6 278 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 ZNF385AQ96PM9 386 aaKnown RBP11.19□□□□□ -0.62
SRM-203ENST00000465788 SIKE1Q9BRV8 207 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 TPT1P8Q9HAU6 139 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 C12orf10Q9HB07 376 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 SLCO1B3Q9NPD5 702 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 ADPRHL2Q9NX46 363 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 CRNNQ9UBG3 495 aaPredicted RBP11.19□□□□□ -0.62
SRM-203ENST00000465788 KCNS2Q9ULS6 477 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 MOKQ9UQ07 419 aa11.19□□□□□ -0.62
SRM-203ENST00000465788 OR2T1O43869 369 aa11.18□□□□□ -0.62
SRM-203ENST00000465788 LMX1BO60663 402 aa11.18□□□□□ -0.62
SRM-203ENST00000465788 EDF1O60869 148 aaKnown RBP11.18□□□□□ -0.62
SRM-203ENST00000465788 NPIPB7O75200 414 aa11.18□□□□□ -0.62
SRM-203ENST00000465788 TGDSO95455 350 aa11.18□□□□□ -0.62
SRM-203ENST00000465788 GKN3PP0CG01 181 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms