RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 KIR2DL2P43627 348 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-205ENST00000465238 CTBP2P56545 445 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 TAS2R41P59536 307 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 CBX1P83916 185 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 BNIP1Q12981 228 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 RNPS1Q15287 305 aaKnown RBP15.76■□□□□ 0.11
COL7A1-205ENST00000465238 DNAL1Q4LDG9 190 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 C5orf46Q6UWT4 87 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 BTLAQ7Z6A9 289 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 WFDC11Q8NEX6 87 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 RNF128Q8TEB7 428 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 GMPPAQ96IJ6 420 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-205ENST00000465238 NSMCE2Q96MF7 247 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 BTBD10Q9BSF8 475 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 NAA11Q9BSU3 229 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-205ENST00000465238 THTPAQ9BU02 230 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 ELOVL5Q9NYP7 299 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 ZNF226Q9NYT6 803 aa15.76■□□□□ 0.11
COL7A1-205ENST00000465238 ARID1AO14497 2285 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 CHP2O43745 196 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 EIF1BO60739 113 aaKnown RBP15.75■□□□□ 0.11
COL7A1-205ENST00000465238 ATP5HO75947 161 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 PDE5AO76074 875 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 GPIP06744 558 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 CD8BP10966 210 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 IMPDH2P12268 514 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 HOXB4P17483 251 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-205ENST00000465238 FPR1P21462 350 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 RASSF2P50749 326 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 SIRPAP78324 504 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 OR7A5Q15622 319 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 ZNF474Q6S9Z5 364 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-205ENST00000465238 SLC41A3Q96GZ6 507 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 MPP4Q96JB8 637 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 WFIKKN1Q96NZ8 548 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 EPYCQ99645 322 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 MUC13Q9H3R2 512 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 GSX1Q9H4S2 264 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-205ENST00000465238 SLC7A7Q9UM01 511 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 CLEC4AQ9UMR7 237 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 EMC9Q9Y3B6 208 aa15.75■□□□□ 0.11
COL7A1-205ENST00000465238 NSD1Q96L73 2696 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-205ENST00000465238 LIPT2A6NK58 231 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 SMAD9O15198 467 aaKnown RBP15.74■□□□□ 0.11
COL7A1-205ENST00000465238 OR2T1O43869 369 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 NPIPB7O75200 414 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 OR5F1O95221 314 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 STAMBPO95630 424 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 POU2F1P14859 743 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 UGT2B10P36537 528 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 RPS5P46782 204 aaKnown RBP15.74■□□□□ 0.11
COL7A1-205ENST00000465238 RASGEF1BQ0VAM2 473 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 PIN1Q13526 163 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-205ENST00000465238 TRIM25Q14258 630 aaKnown RBP15.74■□□□□ 0.11
COL7A1-205ENST00000465238 SHEQ5VZ18 495 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 TTC33Q6PID6 262 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-205ENST00000465238 FAM214BQ7L5A3 538 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 BIVMQ86UB2 503 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 LSRQ86X29 649 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-205ENST00000465238 ABHD3Q8WU67 409 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 SLC25A36Q96CQ1 311 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 SLC7A6OSQ96CW6 309 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-205ENST00000465238 KTI12Q96EK9 354 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-205ENST00000465238 MED18Q9BUE0 208 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 AMBRA1Q9C0C7 1298 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 OPN3Q9H1Y3 402 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-205ENST00000465238 C6orf203Q9P0P8 240 aaPredicted RBP15.74■□□□□ 0.11
COL7A1-205ENST00000465238 ACTR3BQ9P1U1 418 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 KLHL9Q9P2J3 617 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 RIMS3Q9UJD0 308 aa15.74■□□□□ 0.11
COL7A1-205ENST00000465238 TRAV36DV7A0A075B6V5 113 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 C16orf97H3BN30 126 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 CYTIPO60759 359 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 SS18L1O75177 396 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-205ENST00000465238 CGAP01215 116 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 THY1P04216 161 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 CRYGSP22914 178 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 GTF2E2P29084 291 aaKnown RBP15.73■□□□□ 0.11
COL7A1-205ENST00000465238 YAP1P46937 504 aaKnown RBP15.73■□□□□ 0.11
COL7A1-205ENST00000465238 NKX6-1P78426 367 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-205ENST00000465238 EGR4Q05215 589 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 TMEM201Q5SNT2 666 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 CYP2R1Q6VVX0 501 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 LINC00114Q6XXX2 140 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 TSPYL5Q86VY4 417 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-205ENST00000465238 CYP4Z1Q86W10 505 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 CXorf67Q86X51 503 aaPredicted RBP15.73■□□□□ 0.11
COL7A1-205ENST00000465238 P3H2Q8IVL5 708 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 MFSD8Q8NHS3 518 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 PIGXQ8TBF5 258 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 PYURFQ96I23 114 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 CLPTM1LQ96KA5 538 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 C18orf12Q96KH6 178 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 TACO1Q9BSH4 297 aaKnown RBP15.73■□□□□ 0.11
COL7A1-205ENST00000465238 TMEM43Q9BTV4 400 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 GP6Q9HCN6 339 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 V9GYQ6 96 aa15.73■□□□□ 0.11
COL7A1-205ENST00000465238 ABCA2Q9BZC7 2435 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 IGKV1D-42A0A075B6H8 117 aa15.72■□□□□ 0.11
COL7A1-205ENST00000465238 DEFB108AA8MXU0 73 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms