RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 AGAP6Q5VW22 663 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 DHRS4L2Q6PKH6 230 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 CREB3L2Q70SY1 520 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 HDXQ7Z353 690 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 COMTD1Q86VU5 262 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 KRT73Q86Y46 540 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 EPHX4Q8IUS5 362 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 LSMEM1Q8N8F7 131 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 CKAP2Q8WWK9 683 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 STON2Q8WXE9 905 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 PTDSS2Q9BVG9 487 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 SPATA5L1Q9BVQ7 753 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 TMEM38AQ9H6F2 299 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 C12orf10Q9HB07 376 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 RPS6KB2Q9UBS0 482 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 CORO2BQ9UQ03 480 aa16.61■□□□□ 0.25
VARS-220ENST00000461874 ALPK2Q86TB3 2170 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 ELOA3DA6NLF2 546 aaPredicted RBP16.6■□□□□ 0.25
VARS-220ENST00000461874 TPST1O60507 370 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 IGHV4-39P01824 125 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 PTNP21246 168 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 HTR2AP28223 471 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 TTKP33981 857 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 RPS5P46782 204 aaKnown RBP16.6■□□□□ 0.25
VARS-220ENST00000461874 SLC25A3Q00325 362 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 VEZF1Q14119 521 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 ADRM1Q16186 407 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 ELOA3BQ3SY89 546 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 DLEU7Q6UYE1 221 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 ABHD12BQ7Z5M8 362 aaPredicted RBP16.6■□□□□ 0.25
VARS-220ENST00000461874 ELOA3Q8NG57 546 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 SLC25A36Q96CQ1 311 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 KTI12Q96EK9 354 aaPredicted RBP16.6■□□□□ 0.25
VARS-220ENST00000461874 BOD1Q96IK1 185 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 MAGEB18Q96M61 343 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 DHRS9Q9BPW9 319 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 RABEP2Q9H5N1 569 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 VIPAS39Q9H9C1 493 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.6■□□□□ 0.25
VARS-220ENST00000461874 POU2F3Q9UKI9 436 aa16.6■□□□□ 0.25
VARS-220ENST00000461874 A0A1B0GWA3 101 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 EVPLLA8MZ36 301 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 FZD7O75084 574 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 NDUFS7O75251 213 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 PNMTP11086 282 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 SLC6A2P23975 617 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 SELENOPP49908 381 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 PRPS1P60891 318 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 SCARB2Q14108 478 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 GLIPR1L2Q4G1C9 344 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 B3GLCTQ6Y288 498 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 DEPDC4Q8N2C3 294 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 DNAJA4Q8WW22 397 aaPredicted RBP16.59■□□□□ 0.25
VARS-220ENST00000461874 CPPED1Q9BRF8 314 aaPredicted RBP16.59■□□□□ 0.25
VARS-220ENST00000461874 B3GALT5Q9Y2C3 310 aa16.59■□□□□ 0.25
VARS-220ENST00000461874 PRORSD1PA6NEY8 169 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 OR6C65A6NJZ3 312 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 RNF223E7ERA6 249 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 OR2T1O43869 369 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 KRT33AO76009 404 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 CDH2P19022 906 aaPredicted RBP16.58■□□□□ 0.24
VARS-220ENST00000461874 ACVR1BP36896 505 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 LGALS3BPQ08380 585 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 HIKESHIQ53FT3 197 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 RUNDC3AQ59EK9 446 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 C11orf71Q6IPW1 123 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 NIPAL3Q6P499 406 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 C5orf46Q6UWT4 87 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 DNM1P46Q6ZS02 220 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 KDM8Q8N371 416 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 THOC1Q96FV9 657 aaKnown RBP16.58■□□□□ 0.24
VARS-220ENST00000461874 HS6ST2Q96MM7 605 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 ZNF607Q96SK3 696 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 PRR14Q9BWN1 585 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 BARX1Q9HBU1 254 aaPredicted RBP16.58■□□□□ 0.24
VARS-220ENST00000461874 CBLN4Q9NTU7 201 aa16.58■□□□□ 0.24
VARS-220ENST00000461874 LEF1Q9UJU2 399 aaPredicted RBP16.58■□□□□ 0.24
VARS-220ENST00000461874 GDF2Q9UK05 429 aaPredicted RBP16.58■□□□□ 0.24
VARS-220ENST00000461874 IGKV1D-42A0A075B6H8 117 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 ZNF587BE7ETH6 402 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 SERPINB7O75635 380 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 LGI1O95970 557 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 WNT11O96014 354 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 GTF2E2P29084 291 aaKnown RBP16.57■□□□□ 0.24
VARS-220ENST00000461874 AQP1P29972 269 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 ALG10BQ5I7T1 473 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 FAM69AQ5T7M9 428 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 ULK3Q6PHR2 472 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 KLHL24Q6TFL4 600 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 LINGO2Q7L985 606 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 FBXL14Q8N1E6 418 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 MUC15Q8N387 334 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 DPP10Q8N608 796 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 HIPK4Q8NE63 616 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 BHLHE22Q8NFJ8 381 aaPredicted RBP16.57■□□□□ 0.24
VARS-220ENST00000461874 SLC38A4Q969I6 547 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 TAAR8Q969N4 342 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 OXGR1Q96P68 337 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 REG4Q9BYZ8 158 aa16.57■□□□□ 0.24
VARS-220ENST00000461874 ZNF385DQ9H6B1 395 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms