RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 PSMB5P28074 263 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 RORAP35398 523 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 MC3RP41968 323 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 POLR2GP62487 172 aaKnown RBP eCLIP14.24□□□□□ -0.13
SSR4-206ENST00000460616 RPS15P62841 145 aaKnown RBP14.24□□□□□ -0.13
SSR4-206ENST00000460616 POU4F2Q12837 409 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 SLC9A5Q14940 896 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 MPPED2Q15777 294 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 RPE65Q16518 533 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 IGSF11Q5DX21 431 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 ZNF793Q6ZN11 406 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 DPPA4Q7L190 304 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 ZNF546Q86UE3 836 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 ARL14Q8N4G2 192 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 TMIEQ8NEW7 156 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 OR4D10Q8NGI6 311 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 SNX33Q8WV41 574 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 TMEM239Q8WW34 195 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 DPEP2Q9H4A9 486 aa14.24□□□□□ -0.13
SSR4-206ENST00000460616 ZNF443Q9Y2A4 671 aaPredicted RBP14.24□□□□□ -0.13
SSR4-206ENST00000460616 RFPL4AA6NLU0 287 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 RFPL4AL1F8VTS6 287 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 GPR31O00270 319 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 PIN1P1O15428 100 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 EIF4E2O60573 245 aaKnown RBP14.23□□□□□ -0.13
SSR4-206ENST00000460616 HNRNPA1P09651 372 aaKnown RBP eCLIP14.23□□□□□ -0.13
SSR4-206ENST00000460616 ZNF3P17036 446 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 PVALBP20472 110 aaPredicted RBP14.23□□□□□ -0.13
SSR4-206ENST00000460616 FAUP35544 74 aaKnown RBP14.23□□□□□ -0.13
SSR4-206ENST00000460616 REEP5Q00765 189 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 ILF3Q12906 894 aaKnown RBP eCLIP14.23□□□□□ -0.13
SSR4-206ENST00000460616 STPG1Q5TH74 334 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 RPL13AP3Q6NVV1 102 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 WDR88Q6ZMY6 472 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 ZNF547Q8IVP9 402 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 CCDC36Q8IYA8 594 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 CDK20Q8IZL9 346 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 RNF113BQ8IZP6 322 aaKnown RBP14.23□□□□□ -0.13
SSR4-206ENST00000460616 OR13C2Q8NGS9 318 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 CXorf40AQ8TE69 158 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 C15orf40Q8WUR7 153 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 LRIG1Q96JA1 1093 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 CCDC86Q9H6F5 360 aaKnown RBP14.23□□□□□ -0.13
SSR4-206ENST00000460616 CLEC1BQ9P126 229 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 OR5V1Q9UGF6 321 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 GNG8Q9UK08 70 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 V9GY05 133 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 DOCK8Q8NF50 2099 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 A0A1W2PR48 441 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 EGFP01133 1207 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 GP1BAP07359 652 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 CEBPBP17676 345 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 ADH7P40394 386 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 CLDN2P57739 230 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 TAS2R20P59543 309 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 ACTA2P62736 377 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 ACTG2P63267 376 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 SVBPQ8N300 66 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 BOLLQ8N9W6 283 aaKnown RBP14.23□□□□□ -0.13
SSR4-206ENST00000460616 PHYHIPQ92561 330 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 HAVCR1Q96D42 359 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 SLC35A4Q96G79 324 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 CDCA3Q99618 268 aaPredicted RBP14.23□□□□□ -0.13
SSR4-206ENST00000460616 SLC46A2Q9BY10 475 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 MTHFD2LQ9H903 347 aaPredicted RBP14.23□□□□□ -0.13
SSR4-206ENST00000460616 SFXN1Q9H9B4 322 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 CACYBPQ9HB71 228 aaKnown RBP14.23□□□□□ -0.13
SSR4-206ENST00000460616 CYB5R1Q9UHQ9 305 aa14.23□□□□□ -0.13
SSR4-206ENST00000460616 TRAPPC13A5PLN9 417 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 SYNDIG1LA6NDD5 238 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 ACOD1A6NK06 481 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 H0YC42 278 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 K7ESM1 405 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 RBBP9O75884 186 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 SERTAD2Q14140 314 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 PCGF3Q3KNV8 242 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.22□□□□□ -0.13
SSR4-206ENST00000460616 LDLRAD3Q86YD5 345 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 PUSL1Q8N0Z8 303 aaKnown RBP14.22□□□□□ -0.13
SSR4-206ENST00000460616 SYS1Q8N2H4 156 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 OR51A7Q8NH64 312 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 ADAMTS15Q8TE58 950 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 BPIFA2Q96DR5 249 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 ZMYND19Q96E35 227 aaPredicted RBP14.22□□□□□ -0.13
SSR4-206ENST00000460616 PIGMQ9H3S5 423 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 PLEKHM1Q9Y4G2 1056 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 ATG4BQ9Y4P1 393 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 COL4A3Q01955 1670 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 NUP210Q8TEM1 1887 aaPredicted RBP14.22□□□□□ -0.13
SSR4-206ENST00000460616 A0A0D9SG52 128 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 C17orf113A0A1B0GUU1 675 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 LRIT2A6NDA9 550 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 STATHP02808 62 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 CSNK2A2P19784 350 aaPredicted RBP14.22□□□□□ -0.13
SSR4-206ENST00000460616 MPIP34949 423 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 PSMB10P40306 273 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 ZNF136P52737 540 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 TNFRSF17Q02223 184 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 ZNF528Q3MIS6 628 aa14.22□□□□□ -0.13
SSR4-206ENST00000460616 ZNF836Q6ZNA1 936 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms