RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 HEATR5BQ9P2D3 2071 aa12.61□□□□□ -0.39
PTPRE-204ENST00000455661 A0A0D9SG52 128 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 CTNSO60931 367 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 NID1P14543 1247 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 AGTR1P30556 359 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 RPL35P42766 123 aaKnown RBP12.6□□□□□ -0.39
PTPRE-204ENST00000455661 ERVK-25P63136 954 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 GGTLC2Q14390 218 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 DCAF12L2Q5VW00 463 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 CST9Q5W186 159 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 SDR9C7Q8NEX9 313 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 BPIFCQ8NFQ6 507 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 OR51L1Q8NGJ5 315 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 OR4K13Q8NH42 304 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 OR14A16Q8NHC5 309 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 RSPH9Q9H1X1 276 aaPredicted RBP12.6□□□□□ -0.39
PTPRE-204ENST00000455661 XKR8Q9H6D3 395 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 TM7SF3Q9NS93 570 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 RASL12Q9NYN1 266 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 ICAM5Q9UMF0 924 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 KCNK7Q9Y2U2 307 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 MDC1Q14676 2089 aaKnown RBP12.6□□□□□ -0.39
PTPRE-204ENST00000455661 THSD7BQ9C0I4 1608 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 TGM5O43548 720 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 GLSO94925 669 aaPredicted RBP12.6□□□□□ -0.39
PTPRE-204ENST00000455661 FNTBP49356 437 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 RAB28P51157 221 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 UBE2MP61081 183 aaKnown RBP12.6□□□□□ -0.39
PTPRE-204ENST00000455661 CSRP2Q16527 193 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 C4orf46Q504U0 113 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPRE-204ENST00000455661 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.6□□□□□ -0.39
PTPRE-204ENST00000455661 SLC35F3Q8IY50 421 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 OR4C16Q8NGL9 310 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 ARRDC3Q96B67 414 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 MEPEQ9NQ76 525 aaPredicted RBP12.6□□□□□ -0.39
PTPRE-204ENST00000455661 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPRE-204ENST00000455661 ACTR10Q9NZ32 417 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 ZMAT5Q9UDW3 170 aaKnown RBP12.6□□□□□ -0.39
PTPRE-204ENST00000455661 CYB5R1Q9UHQ9 305 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 SERTAD3Q9UJW9 196 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 LRRK1Q38SD2 2015 aa12.6□□□□□ -0.39
PTPRE-204ENST00000455661 H7C417 338 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 MST1P26927 711 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 ITPKBP27987 946 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 BTN3A2P78410 334 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 ELP2Q6IA86 826 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 ZNF546Q86UE3 836 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 DND1Q8IYX4 353 aaKnown RBP12.59□□□□□ -0.39
PTPRE-204ENST00000455661 SAMD14Q8IZD0 417 aaPredicted RBP12.59□□□□□ -0.39
PTPRE-204ENST00000455661 OR2L13Q8N349 312 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 OR6N1Q8NGY5 312 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 GRHL3Q8TE85 626 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 OTUB2Q96DC9 234 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 SCLYQ96I15 445 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 ZNF559Q9BR84 538 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 UQCC2Q9BRT2 126 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 SEMA4CQ9C0C4 833 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 ZNF350Q9GZX5 532 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 CCDC86Q9H6F5 360 aaKnown RBP12.59□□□□□ -0.39
PTPRE-204ENST00000455661 MTFP1Q9UDX5 166 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 FBXL21Q9UKT6 434 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 KANTRA0A1W2PQU2 76 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 GXYLT2A0PJZ3 443 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 OR6C74A6NCV1 312 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 SIGLEC5O15389 551 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 ADRB3P13945 408 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 HIST1H1CP16403 213 aaKnown RBP12.59□□□□□ -0.39
PTPRE-204ENST00000455661 RPS15P62841 145 aaKnown RBP12.59□□□□□ -0.39
PTPRE-204ENST00000455661 S100A12P80511 92 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 SIGLEC14Q08ET2 396 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 STAC2Q6ZMT1 411 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 COX14Q96I36 57 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 C12orf57Q99622 126 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 USB1Q9BQ65 265 aaKnown RBP12.59□□□□□ -0.39
PTPRE-204ENST00000455661 EXO5Q9H790 373 aa12.59□□□□□ -0.39
PTPRE-204ENST00000455661 XRCC3O43542 346 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 RASGRP1O95267 797 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 C8AP07357 584 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 EPCAMP16422 314 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 CNR1P21554 472 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 RPS4Y1P22090 263 aaKnown RBP12.58□□□□□ -0.4
PTPRE-204ENST00000455661 DIO1P49895 249 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 ARHGDIBP52566 201 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 RPE65Q16518 533 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 DCST2Q5T1A1 773 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 MOB3CQ70IA8 216 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 ERN2Q76MJ5 926 aaKnown RBP12.58□□□□□ -0.4
PTPRE-204ENST00000455661 RAB11FIP5Q9BXF6 653 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 PBX4Q9BYU1 374 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 APMAPQ9HDC9 416 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 C2orf42Q9NWW7 574 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 CPNE7Q9UBL6 633 aa12.58□□□□□ -0.4
PTPRE-204ENST00000455661 RNGTTO60942 597 aaKnown RBP12.57□□□□□ -0.4
PTPRE-204ENST00000455661 H2AFB1P0C5Y9 115 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 AKAIN1P0CW23 69 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 ACHEP22303 614 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 RORAP35398 523 aa12.57□□□□□ -0.4
PTPRE-204ENST00000455661 MAGEB1P43366 347 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms