RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 GUSBP1Q15486 140 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 OTUD3Q5T2D3 398 aaPredicted RBP12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 XKRXQ6PP77 449 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 TMPRSS11FQ6ZWK6 438 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 HIST3H2AQ7L7L0 130 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 P3H2Q8IVL5 708 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 NRMQ8IXM6 262 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 RPRMLQ8N4K4 120 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 FAM26EQ8N5C1 309 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 C10orf53Q8N6V4 93 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 OR4K5Q8NGD3 323 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 OR5J2Q8NH18 312 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 ROBO4Q8WZ75 1007 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 HIST1H2ACQ93077 130 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 SLCO4A1Q96BD0 722 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 SLC25A36Q96CQ1 311 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 BPIFA2Q96DR5 249 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 CCDC120Q96HB5 630 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 DENND2DQ9H6A0 471 aaPredicted RBP12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 CHST11Q9NPF2 352 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 FANCFQ9NPI8 374 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 KLHL13Q9P2N7 655 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 EMC9Q9Y3B6 208 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 LYVE1Q9Y5Y7 322 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 USP9XQ93008 2570 aaPredicted RBP12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 TRBV4-1A0A0J9YWV2 114 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 CLEC18AA5D8T8 446 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 WIPF3A6NGB9 483 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 KPNA4O00629 521 aaPredicted RBP12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 DEAF1O75398 565 aaPredicted RBP12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 OR7A10O76100 309 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 AKR7A3O95154 331 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 YES1P07947 543 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 FREM3P0C091 2139 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 ASAH2BP0C7U1 165 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 IFI30P13284 250 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 FUT1P19526 365 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 GRPRP30550 384 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 CHRNB4P30926 498 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 SLC9A3P48764 834 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 P2RY4P51582 365 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 LTBQ06643 244 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 RASGEF1BQ0VAM2 473 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 PMS2P3Q13401 168 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 KPNB1Q14974 876 aaKnown RBP12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 TMEM225Q6GV28 225 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 PPP4R4Q6NUP7 873 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 CLEC18BQ6UXF7 455 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 FAM214BQ7L5A3 538 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 ZNF808Q8N4W9 903 aaPredicted RBP12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 TMEM99Q8N816 258 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 CLEC18CQ8NCF0 446 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 OR4C15Q8NGM1 316 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 OR52J3Q8NH60 311 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 ABHD3Q8WU67 409 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 MOGAT1Q96PD6 335 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 PIGMQ9H3S5 423 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 C20orf141Q9NUB4 165 aa12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 C6orf203Q9P0P8 240 aaPredicted RBP12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 SAMHD1Q9Y3Z3 626 aaKnown RBP12.76□□□□□ -0.37
HMGXB4-204ENST00000455359 A0A0G2JNJ9 132 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 A0A1W2PNV4 684 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 ARRDC5A6NEK1 342 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 ZNF716A6NP11 495 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 KDM4EB2RXH2 506 aaPredicted RBP12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 M0R082 166 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 GNGT2O14610 69 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 DVL2O14641 736 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 CLOCKO15516 846 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 OR6A2O95222 327 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 FASP25445 335 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 DNAJA1P31689 397 aaKnown RBP12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 ADORA2A-AS1P86434 159 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 ZP4Q12836 540 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 SLC17A1Q14916 467 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 ATP6AP1Q15904 470 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 EXOC3L2Q2M3D2 409 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 SLC25A35Q3KQZ1 300 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 TMEM201Q5SNT2 666 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 SLC46A3Q7Z3Q1 461 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 PXKQ7Z7A4 578 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 OR6K3Q8NGY3 331 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 PFN4Q8NHR9 129 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 ZNF417Q8TAU3 575 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 INTS12Q96CB8 462 aaKnown RBP12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 NRBF2Q96F24 287 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 OXGR1Q96P68 337 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 ZNF587Q96SQ5 575 aaPredicted RBP12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 PSD2Q9BQI7 771 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 NDEL1Q9GZM8 345 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 PARPBPQ9NWS1 579 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 Q9UFV3 132 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 RNF6Q9Y252 685 aa12.75□□□□□ -0.37
HMGXB4-204ENST00000455359 IGHV3-15A0A0B4J1V0 119 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 ERICH4A6NGS2 130 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 EFCAB9A8MZ26 197 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 PLPP3O14495 311 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 OR10H3O60404 316 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 TNFSF13O75888 250 aa12.74□□□□□ -0.37
HMGXB4-204ENST00000455359 CCNB2O95067 398 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms