RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 COMMD6Q7Z4G1 85 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 IQCF1Q8N6M8 205 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 THAP6Q8TBB0 222 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 RNASEH2CQ8TDP1 164 aaKnown RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SCAMP4Q969E2 229 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 LSM2Q9Y333 95 aaKnown RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 TRAV19A0A0A6YYK7 116 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SUSD5O60279 629 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 GPR37L1O60883 481 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 RGS11O94810 467 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 BCHEP06276 602 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 H1F0P07305 194 aaKnown RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SRPRAP08240 638 aaKnown RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 BMP7P18075 431 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 CNR1P21554 472 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 STK19P49842 368 aaPredicted RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 PTTG1IPP53801 180 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 RPS26P62854 115 aaKnown RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SHC2P98077 582 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SREBF2Q12772 1141 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 RAB35Q15286 201 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 GSG1Q2KHT4 349 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 IL20RBQ6UXL0 311 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 TIPARPQ7Z3E1 657 aaKnown RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 TMEM173Q86WV6 379 aaPredicted RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 ARL14EPQ8N8R7 260 aaPredicted RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SGIP1Q9BQI5 828 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SFXN1Q9H9B4 322 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 OR52A1Q9UKL2 312 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 PRRC2BQ5JSZ5 2229 aaKnown RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 DISC1C4P0D8 188 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SPINT1O43278 529 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 RAB36O95755 333 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 KLK1P06870 262 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 GIPP09681 153 aaPredicted RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 ARAFP10398 606 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 CYBAP13498 195 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 HMGA1P17096 107 aaKnown RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 APEX1P27695 318 aaKnown RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SPINT3P49223 89 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SHHQ15465 462 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SPDYE7PQ495Y7 208 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 CCSMST1Q4G0I0 132 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 ZDHHC20Q5W0Z9 365 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 ZNF57Q68EA5 555 aaPredicted RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 OAFQ86UD1 273 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 LAS2Q8IYD9 372 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 FTMTQ8N4E7 242 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 HPSE2Q8WWQ2 592 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 NEIL2Q969S2 332 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 ALG14Q96F25 216 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 OR4K3Q96R72 315 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 TSNAXQ99598 290 aaKnown RBP8.92□□□□□ -0.98
LINC01940-201ENST00000455228 ZNF426Q9BUY5 554 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 SLC6A20Q9NP91 592 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 B4GALT6Q9UBX8 382 aa8.92□□□□□ -0.98
LINC01940-201ENST00000455228 GOLGA4Q13439 2230 aaKnown RBP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 ARRDC5A6NEK1 342 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 VSTM5A8MXK1 200 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 SEPT4O43236 478 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 NME6O75414 186 aaPredicted RBP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 SCAF4O95104 1147 aaKnown RBP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 NFYAP23511 347 aaPredicted RBP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 LIM2P55344 173 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 CAV3P56539 151 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 ARF6P62330 175 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 PPP3R1P63098 170 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 PDZD3Q86UT5 571 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 ZNF573Q86YE8 665 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 KCNE4Q8WWG9 221 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 ABHD17AQ96GS6 310 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 OR14A2Q96R54 314 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 ALG8Q9BVK2 526 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 LRFN1Q9P244 771 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 LSM7Q9UK45 103 aaKnown RBP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 YARS2Q9Y2Z4 477 aaKnown RBP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 DYRK1BQ9Y463 629 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 IGLV3-16A0A075B6K0 115 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 TCRBV21S2A2A0A5A6 115 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 ZNF724A8MTY0 619 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 FAM171A2A8MVW0 826 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 PRRG1O14668 218 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 RP2O75695 350 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 APODP05090 189 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 FURINP09958 794 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 PEPDP12955 493 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 ACAA2P42765 397 aaKnown RBP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 MAGEB1P43366 347 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 WDR5P61964 334 aaKnown RBP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 TRA2AQ13595 282 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 SLBPQ14493 270 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC01940-201ENST00000455228 SNAPC1Q16533 368 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 SLITRK4Q8IW52 837 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 OR13D1Q8NGV5 346 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 OR52P1PQ8NH57 321 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 ADAMTS18Q8TE60 1221 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 DUSP19Q8WTR2 217 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 CCDC74BQ96LY2 380 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 SLC22A12Q96S37 553 aa8.91□□□□□ -0.98
LINC01940-201ENST00000455228 LYSMD1Q96S90 227 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms