RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 ATP6V1C2Q8NEY4 427 aa10.08□□□□□ -0.8
TRAF4-206ENST00000454852 FAM57AQ8TBR7 257 aa10.08□□□□□ -0.8
TRAF4-206ENST00000454852 OSTF1Q92882 214 aa10.08□□□□□ -0.8
TRAF4-206ENST00000454852 GPX7Q96SL4 187 aaPredicted RBP10.08□□□□□ -0.8
TRAF4-206ENST00000454852 SF3B5Q9BWJ5 86 aaKnown RBP10.08□□□□□ -0.8
TRAF4-206ENST00000454852 ASPNQ9BXN1 380 aa10.08□□□□□ -0.8
TRAF4-206ENST00000454852 GABARAPL3Q9BY60 117 aa10.08□□□□□ -0.8
TRAF4-206ENST00000454852 EXO5Q9H790 373 aa10.08□□□□□ -0.8
TRAF4-206ENST00000454852 SMURF2Q9HAU4 748 aa10.08□□□□□ -0.8
TRAF4-206ENST00000454852 PAPOLBQ9NRJ5 636 aaKnown RBP10.08□□□□□ -0.8
TRAF4-206ENST00000454852 CDH10Q9Y6N8 788 aa10.08□□□□□ -0.8
TRAF4-206ENST00000454852 KMT2BQ9UMN6 2715 aaPredicted RBP10.08□□□□□ -0.8
TRAF4-206ENST00000454852 ATRXP46100 2492 aa10.08□□□□□ -0.8
TRAF4-206ENST00000454852 DNAJC13O75165 2243 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 LRRN3E7EW58 273 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 H0YC42 278 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 M0R082 166 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 DLGAP1O14490 977 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 PLPP3O14495 311 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 TNFSF11O14788 317 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 WDR1O75083 606 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 RCBTB2O95199 551 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 HOXD4P09016 255 aaPredicted RBP10.07□□□□□ -0.8
TRAF4-206ENST00000454852 SAGP10523 405 aaPredicted RBP10.07□□□□□ -0.8
TRAF4-206ENST00000454852 APEHP13798 732 aaKnown RBP10.07□□□□□ -0.8
TRAF4-206ENST00000454852 GABRA1P14867 456 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 PTNP21246 168 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 IGFBP5P24593 272 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 PTGS2P35354 604 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 SLC16A1P53985 500 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 RAD23AP54725 363 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 TPD52P55327 224 aaPredicted RBP10.07□□□□□ -0.8
TRAF4-206ENST00000454852 HSF1Q00613 529 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 SNCBQ16143 134 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 PRR30Q53SZ7 412 aaPredicted RBP10.07□□□□□ -0.8
TRAF4-206ENST00000454852 EMC4Q5J8M3 183 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 WLSQ5T9L3 541 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 ANKRD34AQ69YU3 496 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 ABLIM2Q6H8Q1 611 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 NHLRC1Q6VVB1 395 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 OAFQ86UD1 273 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 LRRC17Q8N6Y2 441 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 ST6GALNAC3Q8NDV1 305 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 ZNF417Q8TAU3 575 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 CPT1CQ8TCG5 803 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 MAGEE2Q8TD90 523 aaPredicted RBP10.07□□□□□ -0.8
TRAF4-206ENST00000454852 SMPDL3BQ92485 455 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 ZHX1-C8orf76Q96EF9 292 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 TNFRSF13CQ96RJ3 184 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 ZNF587Q96SQ5 575 aaPredicted RBP10.07□□□□□ -0.8
TRAF4-206ENST00000454852 NAA11Q9BSU3 229 aaPredicted RBP10.07□□□□□ -0.8
TRAF4-206ENST00000454852 SRXN1Q9BYN0 137 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 VCXQ9H320 206 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 RNF122Q9H9V4 155 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 MCCC2Q9HCC0 563 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 GP6Q9HCN6 339 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 CHST11Q9NPF2 352 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 KRT84Q9NSB2 600 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 TAS2R5Q9NYW4 299 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 KIF17Q9P2E2 1029 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 RASD1Q9Y272 281 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 SPTA1P02549 2419 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 CACNA1BQ00975 2339 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 MED12Q93074 2177 aa10.07□□□□□ -0.8
TRAF4-206ENST00000454852 KIAA1549Q9HCM3 1950 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 IGKV3D-15A0A087WSY6 115 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 CD8B2A6NJW9 211 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 NPIPA2E9PIF3 369 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 NPIPA3F8WFD2 350 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 MS4A18H0YCH9 400 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 SMAD9O15198 467 aaKnown RBP10.06□□□□□ -0.8
TRAF4-206ENST00000454852 CXCL13O43927 109 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 CYTIPO60759 359 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 NDUFB2O95178 105 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 IGHMP01871 453 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 OPN1LWP04000 364 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 HIST1H2ABP04908 130 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 POU2F1P14859 743 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 CDH2P19022 906 aaPredicted RBP10.06□□□□□ -0.8
TRAF4-206ENST00000454852 ENPP1P22413 925 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 GTF2E2P29084 291 aaKnown RBP10.06□□□□□ -0.8
TRAF4-206ENST00000454852 VHLP40337 213 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 EIF1AXP47813 144 aaKnown RBP10.06□□□□□ -0.8
TRAF4-206ENST00000454852 OR2B6P58173 313 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 FOXD4Q12950 439 aaPredicted RBP10.06□□□□□ -0.8
TRAF4-206ENST00000454852 NFATC3Q12968 1075 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 TAF11Q15544 211 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 MS4A18Q3C1V0 323 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 GXYLT1Q4G148 440 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 SMARCD3Q6STE5 483 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 HIST3H2AQ7L7L0 130 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 NANOGNBQ7Z5D8 188 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 PXKQ7Z7A4 578 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 KIF18BQ86Y91 864 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 UBQLNLQ8IYU4 475 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 C10orf53Q8N6V4 93 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 OR13C2Q8NGS9 318 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 RNF128Q8TEB7 428 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 HIST1H2ACQ93077 130 aa10.06□□□□□ -0.8
TRAF4-206ENST00000454852 GTPBP3Q969Y2 492 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms