RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 POGLUT1Q8NBL1 392 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 GALNT6Q8NCL4 622 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 IL17RDQ8NFM7 739 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF486Q96H40 463 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF764Q96H86 408 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-213ENST00000454468 JSRP1Q96MG2 331 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-213ENST00000454468 FGF21Q9NSA1 209 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 BHLHE40O14503 412 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF749O43361 778 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ORC5O43913 435 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF217O75362 1048 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 EIF4EP06730 217 aaKnown RBP10.97□□□□□ -0.65
SMPD4-213ENST00000454468 FXYD6P3P58550 94 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 GARNL3Q5VVW2 1013 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 TMPRSS12Q86WS5 348 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 GPALPP1Q8IXQ4 340 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ATF6BQ99941 703 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ALG12Q9BV10 488 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 SLITRK2Q9H156 845 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 UBQLN4Q9NRR5 601 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 HSPB11Q9Y547 144 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF106Q9H2Y7 1883 aaKnown RBP10.97□□□□□ -0.65
SMPD4-213ENST00000454468 IGHV1OR15-9A0A0B4J2B8 117 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 OR6C68A6NDL8 312 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 ANXA2P2A6NMY6 339 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 ICOSLGO75144 302 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 MT-ND4P03905 459 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 ANXA2P07355 339 aaKnown RBP10.96□□□□□ -0.65
SMPD4-213ENST00000454468 SMIM10L1P0DMW3 83 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 FNTBP49356 437 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 GALEQ14376 348 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 MELKQ14680 651 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 TOMM34Q15785 309 aaPredicted RBP10.96□□□□□ -0.65
SMPD4-213ENST00000454468 NTRK2Q16620 822 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 RPL13AP3Q6NVV1 102 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 TMEM91Q6ZNR0 172 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 LINC00299Q6ZSB3 139 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 TOR1AIP2Q8NFQ8 470 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 OR5H6Q8NGV6 325 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 OR52N1Q8NH53 320 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 SCARF2Q96GP6 870 aaPredicted RBP10.96□□□□□ -0.65
SMPD4-213ENST00000454468 SMIM10Q96HG1 83 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 DERL3Q96Q80 235 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 CTRCQ99895 268 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 MESP1Q9BRJ9 268 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 MED28Q9H204 178 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 NOX4Q9NPH5 578 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 MED17Q9NVC6 651 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 MRPS17Q9Y2R5 130 aaKnown RBP10.96□□□□□ -0.65
SMPD4-213ENST00000454468 FANCMQ8IYD8 2048 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF264O43296 627 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 CSN2P05814 226 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 GP1BBP13224 206 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 HTR3AP46098 478 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 RFX2P48378 723 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 ARRB1P49407 418 aaPredicted RBP10.96□□□□□ -0.65
SMPD4-213ENST00000454468 PSMD4P55036 377 aaKnown RBP10.96□□□□□ -0.65
SMPD4-213ENST00000454468 LRRC69Q6ZNQ3 347 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 GPAT4Q86UL3 456 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 BRIX1Q8TDN6 353 aaKnown RBP10.96□□□□□ -0.65
SMPD4-213ENST00000454468 GPR119Q8TDV5 335 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 NUDT22Q9BRQ3 303 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 SARGQ9BW04 601 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 MCCC2Q9HCC0 563 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 MRTO4Q9UKD2 239 aaKnown RBP10.96□□□□□ -0.65
SMPD4-213ENST00000454468 FKBP7Q9Y680 259 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 MTCH2Q9Y6C9 303 aa10.96□□□□□ -0.65
SMPD4-213ENST00000454468 ARL6IP5O75915 188 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 RENP00797 406 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 CT45A8P0DMV1 189 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 CT45A9P0DMV2 189 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 PRKACAP17612 351 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 CCR6P51684 374 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 SIRPAP78324 504 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 ANGPT1Q15389 498 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 CCDC58Q4VC31 144 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 CT45A2Q5DJT8 189 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 CEP78Q5JTW2 689 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 SLC38A6Q8IZM9 456 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 OR4D9Q8NGE8 314 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 HSD17B8Q92506 261 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 KTI12Q96EK9 354 aaPredicted RBP10.96□□□□□ -0.66
SMPD4-213ENST00000454468 MRPL48Q96GC5 212 aaKnown RBP10.96□□□□□ -0.66
SMPD4-213ENST00000454468 RNF32Q9H0A6 362 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF304Q9HCX3 659 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 ING3Q9NXR8 418 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 SPATA2Q9UM82 520 aa10.96□□□□□ -0.66
SMPD4-213ENST00000454468 B4DXG7 233 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 SHISA8B8ZZ34 492 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 FZD7O75084 574 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 RLN1P04808 185 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 SYPP08247 313 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 FOLR1P15328 257 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 CD27P26842 260 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 GIFP27352 417 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 PTGS2P35354 604 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 TCTE1Q5JU00 501 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 ZNF248Q8NDW4 579 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 OR2I1PQ8NGU4 316 aa10.95□□□□□ -0.66
SMPD4-213ENST00000454468 DNAJA4Q8WW22 397 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms