RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 SMAP2Q8WU79 429 aaPredicted RBP10.58□□□□□ -0.72
USP40-210ENST00000454354 DNAJA4Q8WW22 397 aaPredicted RBP10.58□□□□□ -0.72
USP40-210ENST00000454354 RADILQ96JH8 1075 aa10.58□□□□□ -0.72
USP40-210ENST00000454354 CGREF1Q99674 301 aa10.58□□□□□ -0.72
USP40-210ENST00000454354 GRIP2Q9C0E4 1043 aa10.58□□□□□ -0.72
USP40-210ENST00000454354 UPB1Q9UBR1 384 aa10.58□□□□□ -0.72
USP40-210ENST00000454354 RPS6KB2Q9UBS0 482 aa10.58□□□□□ -0.72
USP40-210ENST00000454354 LAMP3Q9UQV4 416 aa10.58□□□□□ -0.72
USP40-210ENST00000454354 ANGPT4Q9Y264 503 aa10.58□□□□□ -0.72
USP40-210ENST00000454354 RASD1Q9Y272 281 aa10.58□□□□□ -0.72
USP40-210ENST00000454354 NDUFAF1Q9Y375 327 aa10.58□□□□□ -0.72
USP40-210ENST00000454354 IGKV1D-42A0A075B6H8 117 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 A0A0G2JND7 137 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 A0A1B0GWA3 101 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 OR6C65A6NJZ3 312 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 ABCD4O14678 606 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 ANGPT2O15123 496 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 OR2T1O43869 369 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 SERPINB7O75635 380 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 PNMTP11086 282 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 PTAFRP25105 342 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 MPGP29372 298 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 CDH11P55287 796 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 TGFBR3Q03167 851 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 SELPLGQ14242 412 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 KRTAP21-3Q3LHN1 58 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 TMEM225Q6GV28 225 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 KLHL17Q6TDP4 642 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 TMEM108Q6UXF1 575 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 CREB3L2Q70SY1 520 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 NET1Q7Z628 596 aaPredicted RBP10.57□□□□□ -0.72
USP40-210ENST00000454354 GPAT4Q86UL3 456 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 DTX2Q86UW9 622 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 ARMC8Q8IUR7 673 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 EPHX4Q8IUS5 362 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 WDR31Q8NA23 367 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 C11orf65Q8NCR3 313 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 OR52N5Q8NH56 324 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 SLC38A4Q969I6 547 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 KTI12Q96EK9 354 aaPredicted RBP10.57□□□□□ -0.72
USP40-210ENST00000454354 POM121Q96HA1 1249 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 BDH2Q9BUT1 245 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 SLC17A5Q9NRA2 495 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 MGAT4BQ9UQ53 548 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 AMDHD2Q9Y303 409 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 MAGED1Q9Y5V3 778 aaPredicted RBP10.57□□□□□ -0.72
USP40-210ENST00000454354 HIVEP2P31629 2446 aa10.57□□□□□ -0.72
USP40-210ENST00000454354 A0A0B4J2E0 115 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 A0A1B0GX12 115 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 FAM171A2A8MVW0 826 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 H7C1Q1 480 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 TPST2O60704 377 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 MFN2O95140 757 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 CD40P25942 277 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 RPS5P46782 204 aaKnown RBP10.56□□□□□ -0.72
USP40-210ENST00000454354 SELENOPP49908 381 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 ZNF83P51522 516 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 ATP5J2P56134 94 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 RGS8P57771 180 aaPredicted RBP10.56□□□□□ -0.72
USP40-210ENST00000454354 MTPNP58546 118 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 SLC25A3Q00325 362 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 DMTNQ08495 405 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 ETFDHQ16134 617 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 ALG10BQ5I7T1 473 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 SWT1Q5T5J6 900 aaKnown RBP10.56□□□□□ -0.72
USP40-210ENST00000454354 FAM69AQ5T7M9 428 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 ULK3Q6PHR2 472 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 ABHD12BQ7Z5M8 362 aaPredicted RBP10.56□□□□□ -0.72
USP40-210ENST00000454354 CIARTQ8N365 385 aaPredicted RBP10.56□□□□□ -0.72
USP40-210ENST00000454354 ADPRHL1Q8NDY3 354 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 OR6S1Q8NH40 331 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 SMR3AQ99954 134 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 TRAF4Q9BUZ4 470 aaPredicted RBP10.56□□□□□ -0.72
USP40-210ENST00000454354 LINC00470Q9BZP3 86 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 KAT8Q9H7Z6 458 aaKnown RBP10.56□□□□□ -0.72
USP40-210ENST00000454354 MRGBPQ9NV56 204 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 CISD1Q9NZ45 108 aaKnown RBP10.56□□□□□ -0.72
USP40-210ENST00000454354 B3GAT1Q9P2W7 334 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 RCE1Q9Y256 329 aa10.56□□□□□ -0.72
USP40-210ENST00000454354 CHD3Q12873 2000 aaKnown RBP10.56□□□□□ -0.72
USP40-210ENST00000454354 YLPM1P49750 1951 aaKnown RBP10.56□□□□□ -0.72
USP40-210ENST00000454354 TRAV36DV7A0A075B6V5 113 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 A0A087WUJ7 227 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 A0A1W2PR80 420 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 TRIM64A6NGJ6 449 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 TRIM64BA6NI03 449 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 AIM2O14862 343 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 FMO6PO60774 539 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 ZNF432O94892 652 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 CD8AP01732 235 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 HEXAP06865 529 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 C8BP07358 591 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 HOXB4P17483 251 aaPredicted RBP10.55□□□□□ -0.72
USP40-210ENST00000454354 GTF2E2P29084 291 aaKnown RBP10.55□□□□□ -0.72
USP40-210ENST00000454354 AQP1P29972 269 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 PCGF2P35227 344 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 NCALDP61601 193 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 SPOCK1Q08629 439 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 NFYCQ13952 458 aa10.55□□□□□ -0.72
USP40-210ENST00000454354 OR1Q1Q15612 314 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms