RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ALG2Q9H553 416 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 ZNF385DQ9H6B1 395 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 TMEM27Q9HBJ8 222 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 MRGBPQ9NV56 204 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 ZNF701Q9NV72 531 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 FAIMQ9NVQ4 179 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 TESQ9UGI8 421 aaKnown RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 AMDHD2Q9Y303 409 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 MAGED1Q9Y5V3 778 aaPredicted RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 SLC25A15Q9Y619 301 aa9.4□□□□□ -0.9
DDX39A-203ENST00000454233 FLNAP21333 2647 aaKnown RBP9.4□□□□□ -0.9
DDX39A-203ENST00000454233 A0A1W2PR80 420 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 OR6C65A6NJZ3 312 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 H7C1Q1 480 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 M0R1B8 84 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 PDLIM1O00151 329 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 TPST1O60507 370 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 P2RY4P51582 365 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 CDH11P55287 796 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 FOXG1P55316 489 aaPredicted RBP9.39□□□□□ -0.91
DDX39A-203ENST00000454233 MTPNP58546 118 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 ADRM1Q16186 407 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 GLIPR1L2Q4G1C9 344 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 C1QTNF12Q5T7M4 302 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 FAM69AQ5T7M9 428 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 FAM91A1Q658Y4 838 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 ULK3Q6PHR2 472 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 SLC22A25Q6T423 547 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 CREB3L2Q70SY1 520 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 NET1Q7Z628 596 aaPredicted RBP9.39□□□□□ -0.91
DDX39A-203ENST00000454233 RETREG3Q86VR2 466 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 RANBP3LQ86VV4 465 aaPredicted RBP9.39□□□□□ -0.91
DDX39A-203ENST00000454233 SLC30A8Q8IWU4 369 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 PIAS4Q8N2W9 510 aaPredicted RBP9.39□□□□□ -0.91
DDX39A-203ENST00000454233 ZIC4Q8N9L1 334 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 KTI12Q96EK9 354 aaPredicted RBP9.39□□□□□ -0.91
DDX39A-203ENST00000454233 TMEM120AQ9BXJ8 343 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 AMBRA1Q9C0C7 1298 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 SLC17A5Q9NRA2 495 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 CISD1Q9NZ45 108 aaKnown RBP9.39□□□□□ -0.91
DDX39A-203ENST00000454233 NPAP1Q9NZP6 1156 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 POU2F3Q9UKI9 436 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 CADP27708 2225 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 USF3Q68DE3 2245 aa9.39□□□□□ -0.91
DDX39A-203ENST00000454233 SETD2Q9BYW2 2564 aaPredicted RBP9.38□□□□□ -0.91
DDX39A-203ENST00000454233 TRAV36DV7A0A075B6V5 113 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 SHISA9B4DS77 424 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 FTCDNL1E5RQL4 147 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 ZNF587BE7ETH6 402 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 AIM2O14862 343 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 MFN2O95140 757 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 WNT11O96014 354 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 SOD3P08294 240 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 DANCRP0C864 163 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 ZNF43P17038 809 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 CDH2P19022 906 aaPredicted RBP9.38□□□□□ -0.91
DDX39A-203ENST00000454233 CD40P25942 277 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 HTR2AP28223 471 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 PRPS1P60891 318 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 IL1RL1Q01638 556 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 EGR4Q05215 589 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 C1DQ13901 141 aaKnown RBP9.38□□□□□ -0.91
DDX39A-203ENST00000454233 CYLC2Q14093 348 aaPredicted RBP9.38□□□□□ -0.91
DDX39A-203ENST00000454233 MFSD13AQ14CX5 517 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 OR1Q1Q15612 314 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 INTS11Q5TA45 600 aaKnown RBP9.38□□□□□ -0.91
DDX39A-203ENST00000454233 NIPAL3Q6P499 406 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 CLEC9AQ6UXN8 241 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 COMTD1Q86VU5 262 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 PTOV1Q86YD1 416 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 WDR31Q8NA23 367 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 SMYD1Q8NB12 490 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 SLC26A7Q8TE54 656 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 COX4I2Q96KJ9 171 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 OXGR1Q96P68 337 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 EPYCQ99645 322 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 PTDSS2Q9BVG9 487 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 C1QTNF6Q9BXI9 259 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 B3GALT5Q9Y2C3 310 aa9.38□□□□□ -0.91
DDX39A-203ENST00000454233 A0A087WUJ7 227 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 TRIM64A6NGJ6 449 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 TRIM64BA6NI03 449 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 M0QX08 132 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 M0R082 166 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 OVOL3O00110 214 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 SMAD7O15105 426 aaKnown RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 AKAP8O43823 692 aaKnown RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 SLC43A1O75387 559 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 C8BP07358 591 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 VIMP08670 466 aaKnown RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 NQO1P15559 274 aaKnown RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 SELENOPP49908 381 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 ARFIP2P53365 341 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 CLDN17P56750 224 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 PCBP3P57721 371 aaKnown RBP9.37□□□□□ -0.91
DDX39A-203ENST00000454233 DMTNQ08495 405 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 SELPLGQ14242 412 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 MAPRE2Q15555 327 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 ETFDHQ16134 617 aa9.37□□□□□ -0.91
DDX39A-203ENST00000454233 PGGHGQ32M88 737 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms