RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 PKD1L2Q7Z442 2459 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 BAHCC1Q9P281 2608 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 MGAQ8IWI9 3026 aa3.67□□□□□ -1.82
LINC00393-202ENST00000452852 KALRNO60229 2985 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 RP1P56715 2156 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 A0A1W2PQ67 120 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 LOC390937A0A1W2PQ73 354 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 ZSCAN5BA6NJL1 495 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 SMIM1B2RUZ4 78 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 D6RAR5 112 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 NPIPA2E9PIF3 369 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 FAM72CH0Y354 149 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 J3QKU1 62 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 DFFAO00273 331 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 CD160O95971 181 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 MT-ND1P03886 318 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 FCER2P06734 321 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 PAX1P15863 534 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 HNF1AP20823 631 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 UQCRC2P22695 453 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 PSMA2P25787 234 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 ANP32AP39687 249 aaKnown RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 HTR5AP47898 357 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 KLK7P49862 253 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 NDST2P52849 883 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 GSCP56915 257 aaPredicted RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 LINC01547P58512 204 aaPredicted RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 PPIAP62937 165 aaKnown RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 MYL5Q02045 173 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 RBBP4Q09028 425 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 PJVKQ0ZLH3 352 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF235Q14590 738 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 SLC17A1Q14916 467 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 EFTUD2Q15029 972 aaKnown RBP eCLIP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 TAB1Q15750 504 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 KRTAP27-1Q3LI81 207 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 ACSF3Q4G176 576 aaPredicted RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 TMEM52BQ4KMG9 183 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 FILIP1LQ4L180 1135 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 RFTN2Q52LD8 501 aaPredicted RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 FAM72AQ5TYM5 149 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 FAM72DQ6L9T8 149 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 WDR59Q6PJI9 974 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 ZYG11AQ6WRX3 759 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF841Q6ZN19 808 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 CENPUQ71F23 418 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 P4HA3Q7Z4N8 544 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 FAM72BQ86X60 149 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 HOGA1Q86XE5 327 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 DCUN1D3Q8IWE4 304 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 OR4N5Q8IXE1 308 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 SLC22A15Q8IZD6 547 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 UMODL1-AS1Q8N2C9 162 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 PYROXD2Q8N2H3 581 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 BBS5Q8N3I7 341 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 Q8N9G6 341 aaPredicted RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 OR4D10Q8NGI6 311 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 OR10G8Q8NGN5 311 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 PDCD6IPQ8WUM4 868 aaKnown RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 ZNRF4Q8WWF5 429 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 TMEM159Q96B96 161 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 PINX1Q96BK5 328 aaKnown RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 CCNL2Q96S94 520 aaPredicted RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 ZBTB18Q99592 522 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 TBCDQ9BTW9 1192 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 APOOQ9BUR5 198 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 CAPS2Q9BXY5 557 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 NAT10Q9H0A0 1025 aaKnown RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 MMP28Q9H239 520 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 TCEAL2Q9H3H9 227 aaPredicted RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 LRRN3Q9H3W5 708 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 DHX35Q9H5Z1 703 aaKnown RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 ALG9Q9H6U8 611 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 SUDS3Q9H7L9 328 aaPredicted RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF71Q9NQZ8 489 aaPredicted RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 C1orf123Q9NWV4 160 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 PTBP2Q9UKA9 531 aaKnown RBP3.66□□□□□ -1.82
LINC00393-202ENST00000452852 IKZF3Q9UKT9 509 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 U3KQA8 63 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 KNTC1P50748 2209 aa3.66□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF106Q9H2Y7 1883 aaKnown RBP3.65□□□□□ -1.82
LINC00393-202ENST00000452852 ASXL3Q9C0F0 2248 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 TSPAN11A1L157 253 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 A8MX80 341 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 TMCO5BA8MYB1 307 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 K7ENP7 123 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 IMPA2O14732 288 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 SURF4O15260 269 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CFLARO15519 480 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 OR1F1O43749 312 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 SNNO75324 88 aaPredicted RBP3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CLPTM1O96005 669 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 ERVK-10P10266 1014 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 LIPCP11150 499 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 SFTPCP11686 197 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 HSPA9P38646 679 aaKnown RBP3.65□□□□□ -1.83
LINC00393-202ENST00000452852 MMP12P39900 470 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 GNPDA1P46926 289 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 CSNK1DP48730 415 aa3.65□□□□□ -1.83
LINC00393-202ENST00000452852 AP1S1P61966 158 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms