RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 APEHP13798 732 aaKnown RBP9.48□□□□□ -0.89
USP1-204ENST00000452143 CDH2P19022 906 aaPredicted RBP9.48□□□□□ -0.89
USP1-204ENST00000452143 CDKN2CP42773 168 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 P2RY4P51582 365 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 CRISP3P54108 245 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 FAM120AOSQ5T036 256 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 PRAMEF8Q5VWM4 474 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 PRAMEF7Q5VXH5 474 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 TMEM225Q6GV28 225 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 ZNF836Q6ZNA1 936 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 ZNF621Q6ZSS3 439 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 CREB3L2Q70SY1 520 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 GLB1L3Q8NCI6 653 aaPredicted RBP9.48□□□□□ -0.89
USP1-204ENST00000452143 NUP37Q8NFH4 326 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 MSI2Q96DH6 328 aaKnown RBP9.48□□□□□ -0.89
USP1-204ENST00000452143 AURKBQ96GD4 344 aaPredicted RBP9.48□□□□□ -0.89
USP1-204ENST00000452143 OR52E6Q96RD3 313 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 ZBTB18Q99592 522 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 PRR14Q9BWN1 585 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 LINC00470Q9BZP3 86 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 CHODLQ9H9P2 273 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 RLIMQ9NVW2 624 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 ADPRHL2Q9NX46 363 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 RASD1Q9Y272 281 aa9.48□□□□□ -0.89
USP1-204ENST00000452143 TENM1Q9UKZ4 2725 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 IGHV4-61A0A0C4DH41 118 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 KLF11O14901 512 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 RGS16O15492 202 aaPredicted RBP9.47□□□□□ -0.89
USP1-204ENST00000452143 NPIPB7O75200 414 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 LGI1O95970 557 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 IGKV3-15P01624 115 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 IGLV1-44P01699 117 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 C1QCP02747 245 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 ERCC1P07992 297 aaPredicted RBP9.47□□□□□ -0.89
USP1-204ENST00000452143 ALDOCP09972 364 aaKnown RBP9.47□□□□□ -0.89
USP1-204ENST00000452143 TFPTP0C1Z6 253 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 OR4A8P0C604 315 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 ZNF23P17027 643 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 ACAA2P42765 397 aaKnown RBP9.47□□□□□ -0.89
USP1-204ENST00000452143 SELENOPP49908 381 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 UFM1P61960 85 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 NAAAQ02083 359 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 SQLEQ14534 574 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 ADIPOQQ15848 244 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 KRT71Q3SY84 523 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 COX20Q5RI15 118 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 C1orf140Q5VVS0 124 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 ANKRD16Q6P6B7 361 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 SPATA19Q7Z5L4 167 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 CADM2Q8N3J6 435 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 MREGQ8N565 214 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 ARIH2OSQ8N7S6 290 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 OR4F15Q8NGB8 312 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 OR52P1PQ8NH57 321 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 PNPT1Q8TCS8 783 aaKnown RBP9.47□□□□□ -0.89
USP1-204ENST00000452143 STK35Q8TDR2 534 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 SLC35B4Q969S0 331 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 VRK1Q99986 396 aaPredicted RBP9.47□□□□□ -0.89
USP1-204ENST00000452143 C19orf24Q9BVV8 132 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 PLK3Q9H4B4 646 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 ARMC7Q9H6L4 198 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 ZNF442Q9H7R0 627 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 CACYBPQ9HB71 228 aaKnown RBP9.47□□□□□ -0.89
USP1-204ENST00000452143 THUMPD1Q9NXG2 353 aaKnown RBP9.47□□□□□ -0.89
USP1-204ENST00000452143 RCE1Q9Y256 329 aa9.47□□□□□ -0.89
USP1-204ENST00000452143 ZNF443Q9Y2A4 671 aaPredicted RBP9.47□□□□□ -0.89
USP1-204ENST00000452143 SLC35F4A4IF30 521 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 TMEM229AB2RXF0 380 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 RPL36A-HNRNPH2H7BZ11 118 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 RFXANKO14593 260 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 FZD7O75084 574 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 AHSA1O95433 338 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 IL6P05231 212 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 BCHEP06276 602 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 CECR9P0C854 216 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 GKN3PP0CG01 181 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 ZCCHC18P0CG32 403 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 NCF2P19878 526 aaPredicted RBP9.46□□□□□ -0.9
USP1-204ENST00000452143 GIFP27352 417 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 GTF2E2P29084 291 aaKnown RBP9.46□□□□□ -0.9
USP1-204ENST00000452143 IL12AP29459 219 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 IDH3GP51553 393 aaPredicted RBP9.46□□□□□ -0.9
USP1-204ENST00000452143 MVDP53602 400 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 NME5P56597 212 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 STX3Q13277 289 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 LARS2Q15031 903 aaKnown RBP9.46□□□□□ -0.9
USP1-204ENST00000452143 MAPK11Q15759 364 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 IQCCQ4KMZ1 466 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 WDR93Q6P2C0 686 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 NIPAL3Q6P499 406 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 TREML4Q6UXN2 200 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 VRK2Q86Y07 508 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 EPHX4Q8IUS5 362 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 MFSD8Q8NHS3 518 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 BCL2L2Q92843 193 aaPredicted RBP9.46□□□□□ -0.9
USP1-204ENST00000452143 C3orf49Q96BT1 292 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 TRIM44Q96DX7 344 aaPredicted RBP9.46□□□□□ -0.9
USP1-204ENST00000452143 FOXN4Q96NZ1 517 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 BPESC1Q9GZL8 116 aa9.46□□□□□ -0.9
USP1-204ENST00000452143 RAB1BQ9H0U4 201 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms