RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 MBOAT2Q6ZWT7 520 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 TMEM179BQ7Z7N9 219 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 C9orf106Q8NAJ2 232 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 OR4K5Q8NGD3 323 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 PFN4Q8NHR9 129 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 PIGXQ8TBF5 258 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 MAGEE2Q8TD90 523 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-202ENST00000451053 TMEM239Q8WW34 195 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 ROBO4Q8WZ75 1007 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 TAAR8Q969N4 342 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 CPNE4Q96A23 557 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-202ENST00000451053 SLC19A3Q9BZV2 496 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 TIGARQ9NQ88 270 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 PAQR5Q9NXK6 330 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-202ENST00000451053 MGAT4BQ9UQ53 548 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 TMEM5Q9Y2B1 443 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 MED31Q9Y3C7 131 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 ZNF175Q9Y473 711 aa11.66□□□□□ -0.54
VPS33A-202ENST00000451053 TRAV36DV7A0A075B6V5 113 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 A0A1B0GUH1 482 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 MBD3L4A6NDZ8 208 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 MBD3L3A6NE82 208 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 MBD3L5A6NJ08 208 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 ZNF814B7Z6K7 855 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 FTCDNL1E5RQL4 147 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 SMAD9O15198 467 aaKnown RBP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 ADAP00813 363 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 BGLAPP02818 100 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 ALPLP05186 524 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 ZNF26P17031 533 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 ENPP1P22413 925 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 LSM11P83369 360 aaKnown RBP eCLIP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 PMPCAQ10713 525 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 OR7A5Q15622 319 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 FAHD1Q6P587 224 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 C5orf46Q6UWT4 87 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 IZUMO2Q6UXV1 221 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 P4HA3Q7Z4N8 544 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 CDK20Q8IZL9 346 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 GALNT4Q8N4A0 578 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 AQP11Q8NBQ7 271 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 MBD3L2Q8NHZ7 208 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 WNT2BQ93097 391 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 SLC25A36Q96CQ1 311 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 CCDC120Q96HB5 630 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 FEVQ99581 238 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 ZNF184Q99676 751 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 TACO1Q9BSH4 297 aaKnown RBP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 MEPEQ9NQ76 525 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 KRT84Q9NSB2 600 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 ERRFI1Q9UJM3 462 aaPredicted RBP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 MCTS1Q9ULC4 181 aaKnown RBP11.65□□□□□ -0.54
VPS33A-202ENST00000451053 TRAPPC4Q9Y296 219 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 POFUT2Q9Y2G5 429 aa11.65□□□□□ -0.54
VPS33A-202ENST00000451053 ESPL1Q14674 2120 aa11.65□□□□□ -0.55
VPS33A-202ENST00000451053 POLEQ07864 2286 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 A0A087WUU8 490 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 LRRN3E7EW58 273 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 RAMP1O60894 148 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 AKR7A3O95154 331 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 IGF2P01344 180 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 GSTM3P21266 225 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 CBLP22681 906 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 IGFBP5P24593 272 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 SLC35A1P78382 337 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 ADORA2A-AS1P86434 159 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 LTBQ06643 244 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 LAPTM4AQ15012 233 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 SEC23BQ15437 767 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 FAM69AQ5T7M9 428 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 TMEM211Q6ICI0 200 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 ZNF770Q6IQ21 691 aaPredicted RBP11.64□□□□□ -0.55
VPS33A-202ENST00000451053 TBPL2Q6SJ96 375 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 FCRLAQ7L513 359 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 HS3ST5Q8IZT8 346 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 NAXEQ8NCW5 288 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 OR9Q2Q8NGE9 314 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 MFSD8Q8NHS3 518 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 GNPDA2Q8TDQ7 276 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 RNF128Q8TEB7 428 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 MOGAT1Q96PD6 335 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 SLC29A1Q99808 456 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 TAPBPLQ9BX59 468 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 DGCR6LQ9BY27 220 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 PRRG4Q9BZD6 226 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 C20orf141Q9NUB4 165 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 SMPD3Q9NY59 655 aaPredicted RBP11.64□□□□□ -0.55
VPS33A-202ENST00000451053 SEC14L4Q9UDX3 406 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 SLC5A6Q9Y289 635 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 MAGED1Q9Y5V3 778 aaPredicted RBP11.64□□□□□ -0.55
VPS33A-202ENST00000451053 NBASA2RRP1 2371 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 MPDZO75970 2070 aa11.64□□□□□ -0.55
VPS33A-202ENST00000451053 ARHGAP21Q5T5U3 1957 aa11.63□□□□□ -0.55
VPS33A-202ENST00000451053 A0A0G2JNJ9 132 aa11.63□□□□□ -0.55
VPS33A-202ENST00000451053 ENO4A6NNW6 628 aa11.63□□□□□ -0.55
VPS33A-202ENST00000451053 DNPH1O43598 174 aa11.63□□□□□ -0.55
VPS33A-202ENST00000451053 OR2T1O43869 369 aa11.63□□□□□ -0.55
VPS33A-202ENST00000451053 FZD7O75084 574 aa11.63□□□□□ -0.55
VPS33A-202ENST00000451053 CH25HO95992 272 aa11.63□□□□□ -0.55
VPS33A-202ENST00000451053 FCGR2AP12318 317 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms