RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ASPNQ9BXN1 380 aa12.61□□□□□ -0.39
SHMT2-203ENST00000449049 PRDM14Q9GZV8 571 aa12.61□□□□□ -0.39
SHMT2-203ENST00000449049 MCCC2Q9HCC0 563 aa12.61□□□□□ -0.39
SHMT2-203ENST00000449049 IL20Q9NYY1 176 aa12.61□□□□□ -0.39
SHMT2-203ENST00000449049 CDH10Q9Y6N8 788 aa12.61□□□□□ -0.39
SHMT2-203ENST00000449049 TRAV27A0A087WT01 109 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 OR14I1A6ND48 311 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 EIF4E1BA6NMX2 242 aaKnown RBP12.6□□□□□ -0.39
SHMT2-203ENST00000449049 M0R082 166 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 UQCRC1P31930 480 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 NUP107P57740 925 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 OR2B6P58173 313 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 RAC3P60763 192 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 ESRRGP62508 458 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 SGCBQ16585 318 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 ZNF239Q16600 458 aaKnown RBP12.6□□□□□ -0.39
SHMT2-203ENST00000449049 PDSS1Q5T2R2 415 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 HBMQ6B0K9 141 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 RPL13AP3Q6NVV1 102 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 ARHGAP11AQ6P4F7 1023 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 TMEM154Q6P9G4 183 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 NANOGNBQ7Z5D8 188 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 ADPRHL1Q8NDY3 354 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 OR51A7Q8NH64 312 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 OR10D3Q8NH80 312 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 ZNF417Q8TAU3 575 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 FANK1Q8TC84 345 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 TNFRSF13CQ96RJ3 184 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 ZNF587Q96SQ5 575 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-203ENST00000449049 SLX1AQ9BQ83 275 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 OR52D1Q9H346 318 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 TOR3AQ9H497 397 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 EGLN3Q9H6Z9 239 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 SEC14L4Q9UDX3 406 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 CNTRLQ7Z7A1 2325 aa12.6□□□□□ -0.39
SHMT2-203ENST00000449049 A0A1B0GTH9 108 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 E9PQ18 207 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 RCBTB2O95199 551 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 SOX14O95416 240 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 HIST1H2ABP04908 130 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 GTF2E2P29084 291 aaKnown RBP12.59□□□□□ -0.39
SHMT2-203ENST00000449049 H3F3AP84243 136 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 HSF1Q00613 529 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 SLC36A3Q495N2 470 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 SMARCD3Q6STE5 483 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 HIST3H2AQ7L7L0 130 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 CHERPQ8IWX8 916 aaKnown RBP12.59□□□□□ -0.39
SHMT2-203ENST00000449049 GHDCQ8N2G8 530 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 HIST1H2ACQ93077 130 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 SARAFQ96BY9 339 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 SRXN1Q9BYN0 137 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 PLA2G12AQ9BZM1 189 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 CHST11Q9NPF2 352 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 CHCHD3Q9NX63 227 aaKnown RBP12.59□□□□□ -0.39
SHMT2-203ENST00000449049 TNFRSF10DQ9UBN6 386 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 B3GALT5Q9Y2C3 310 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 MPDZO75970 2070 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 AKR7A3O95154 331 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 IGFBP1P08833 259 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-203ENST00000449049 P2RY4P51582 365 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 AGFG1P52594 562 aaKnown RBP12.59□□□□□ -0.39
SHMT2-203ENST00000449049 CRISP1P54107 249 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 CARD18P57730 90 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 PRPS1P60891 318 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 NPRL3Q12980 569 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 ZIK1Q3SY52 487 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-203ENST00000449049 GXYLT1Q4G148 440 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 PRR30Q53SZ7 412 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-203ENST00000449049 PAQR6Q6TCH4 344 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 H1FNTQ75WM6 255 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-203ENST00000449049 FGD2Q7Z6J4 655 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 SLC43A2Q8N370 569 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 OR8D4Q8NGM9 314 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 OSTF1Q92882 214 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 RIBC2Q9H4K1 309 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 FANCFQ9NPI8 374 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 PAQR5Q9NXK6 330 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-203ENST00000449049 TAS2R5Q9NYW4 299 aa12.59□□□□□ -0.39
SHMT2-203ENST00000449049 H3BN98 237 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 PLPP3O14495 311 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 ZZEF1O43149 2961 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 CXCL13O43927 109 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 EIF1BO60739 113 aaKnown RBP12.58□□□□□ -0.4
SHMT2-203ENST00000449049 POLR2IP36954 125 aaKnown RBP12.58□□□□□ -0.4
SHMT2-203ENST00000449049 EIF1AXP47813 144 aaKnown RBP12.58□□□□□ -0.4
SHMT2-203ENST00000449049 RPS3AP61247 264 aaKnown RBP12.58□□□□□ -0.4
SHMT2-203ENST00000449049 SRYQ05066 204 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 RPL18Q07020 188 aaKnown RBP12.58□□□□□ -0.4
SHMT2-203ENST00000449049 ZP4Q12836 540 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 PMS2P3Q13401 168 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 C3AR1Q16581 482 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 THSD4Q6ZMP0 1018 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 PM20D2Q8IYS1 436 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 TMEM99Q8N816 258 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 LRRC75AQ8NAA5 344 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 CPNE4Q96A23 557 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-203ENST00000449049 GPX7Q96SL4 187 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-203ENST00000449049 GRIP2Q9C0E4 1043 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 TIGARQ9NQ88 270 aa12.58□□□□□ -0.4
SHMT2-203ENST00000449049 ASF1BQ9NVP2 202 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms