RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 DNAL1Q4LDG9 190 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 ZNF474Q6S9Z5 364 aaPredicted RBP12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 LINC00114Q6XXX2 140 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 MARVELD3Q96A59 401 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 MCUR1Q96AQ8 359 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 HS6ST2Q96MM7 605 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 THTPAQ9BU02 230 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 SLC19A3Q9BZV2 496 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 AMBRA1Q9C0C7 1298 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 MUC13Q9H3R2 512 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 PARPBPQ9NWS1 579 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 ING1Q9UK53 422 aaPredicted RBP12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 B3GALT5Q9Y2C3 310 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 V9GYQ6 96 aa12.46□□□□□ -0.41
GTF3C3-206ENST00000448539 INTS1Q8N201 2190 aaKnown RBP12.46□□□□□ -0.42
GTF3C3-206ENST00000448539 CENPEQ02224 2701 aa12.46□□□□□ -0.42
GTF3C3-206ENST00000448539 ITPR2Q14571 2701 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 ZNF716A6NP11 495 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 C16orf97H3BN30 126 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 M0R082 166 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 KPNA4O00629 521 aaPredicted RBP12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 RAMP1O60894 148 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 PDE5AO76074 875 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 LYPD3O95274 346 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 MT-ATP6P00846 226 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 THY1P04216 161 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 HIST1H2ABP04908 130 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 ITGA2P17301 1181 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 IGFBP2P18065 325 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 GRPRP30550 384 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 RBM34P42696 430 aaKnown RBP12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 FAM27E3Q08E93 113 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 PMS2P3Q13401 168 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 SNTB1Q13884 538 aaKnown RBP12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 SLC17A1Q14916 467 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 CASP12Q6UXS9 341 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 TFAP2EQ6VUC0 442 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 WDR88Q6ZMY6 472 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 H1FNTQ75WM6 255 aaPredicted RBP12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 HIST3H2AQ7L7L0 130 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 TSPYL5Q86VY4 417 aaPredicted RBP12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 UBE2J2Q8N2K1 259 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 OR9K2Q8NGE7 335 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 ZNF417Q8TAU3 575 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 HIST1H2ACQ93077 130 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 APH1AQ96BI3 265 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 PYURFQ96I23 114 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 ZNF587Q96SQ5 575 aaPredicted RBP12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 KLHL4Q9C0H6 718 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 ACTR3BQ9P1U1 418 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 NDRG3Q9UGV2 375 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 FLVCR1Q9Y5Y0 555 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 ENPP4Q9Y6X5 453 aa12.45□□□□□ -0.42
GTF3C3-206ENST00000448539 OR6A2O95222 327 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 BGLAPP02818 100 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 UMPSP11172 480 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 ZNF43P17038 809 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 OR3A2P47893 321 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 PCYT1AP49585 367 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 RASSF2P50749 326 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 C1DQ13901 141 aaKnown RBP12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 TRIM25Q14258 630 aaKnown RBP12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 TRAM2Q15035 370 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 DHFR2Q86XF0 187 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 NKAIN4Q8IVV8 208 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 SCAIQ8N9R8 606 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 ACBD4Q8NC06 268 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 TMEM255BQ8WV15 326 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 TMEM239Q8WW34 195 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 LRGUKQ96M69 825 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 OXGR1Q96P68 337 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 PRSS27Q9BQR3 290 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 NANSQ9NR45 359 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 KCNN3Q9UGI6 736 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 A4GNTQ9UNA3 340 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 MED31Q9Y3C7 131 aa12.44□□□□□ -0.42
GTF3C3-206ENST00000448539 J3KTA2 159 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 ATP5HO75947 161 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 CH25HO95992 272 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 MT-ND1P03886 318 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 AHCYP23526 432 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 UGT2B10P36537 528 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 P2RY4P51582 365 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 BNIP1Q12981 228 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 ZNF74Q16587 644 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 MTX3Q5HYI7 312 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 CYP2R1Q6VVX0 501 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 RRM2BQ7LG56 351 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 AAED1Q7RTV5 226 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 OFCC1Q8IZS5 231 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 KDM8Q8N371 416 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 ADPRHL1Q8NDY3 354 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 LINC01560Q8TB33 94 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 FAM222BQ8WU58 562 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 POP5Q969H6 163 aaKnown RBP12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 CCDC124Q96CT7 223 aaKnown RBP12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 MOGAT1Q96PD6 335 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 BTBD10Q9BSF8 475 aa12.43□□□□□ -0.42
GTF3C3-206ENST00000448539 ZNF426Q9BUY5 554 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms