RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 ZC3H12DA2A288 527 aaKnown RBP11.02□□□□□ -0.65
SSR4-205ENST00000447375 A8MVM7 634 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 NME4O00746 187 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 NDUFAB1O14561 156 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 SMAD9O15198 467 aaKnown RBP11.02□□□□□ -0.65
SSR4-205ENST00000447375 TPST2O60704 377 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 CYTIPO60759 359 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 FMO6PO60774 539 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 NPIPB7O75200 414 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 OPN1SWP03999 348 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 FESP07332 822 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 IMPDH2P12268 514 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 HTR2AP28223 471 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 NUDT2P50583 147 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 SLC7A2P52569 658 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 CTBP2P56545 445 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 RGS8P57771 180 aaPredicted RBP11.02□□□□□ -0.65
SSR4-205ENST00000447375 LIPEQ05469 1076 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 NRF1Q16656 503 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 C6orf52Q5T4I8 152 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 GKAP1Q5VSY0 366 aaPredicted RBP11.02□□□□□ -0.65
SSR4-205ENST00000447375 ZNF474Q6S9Z5 364 aaPredicted RBP11.02□□□□□ -0.65
SSR4-205ENST00000447375 C6orf89Q6UWU4 347 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 MICU2Q8IYU8 434 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 ZNF610Q8N9Z0 462 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 OR6K3Q8NGY3 331 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 STK35Q8TDR2 534 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 DNAJA4Q8WW22 397 aaPredicted RBP11.02□□□□□ -0.65
SSR4-205ENST00000447375 RASSF5Q8WWW0 418 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 KCNK17Q96T54 332 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 BCO1Q9HAY6 547 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 KLHL13Q9P2N7 655 aa11.02□□□□□ -0.65
SSR4-205ENST00000447375 TESQ9UGI8 421 aaKnown RBP11.02□□□□□ -0.65
SSR4-205ENST00000447375 ING1Q9UK53 422 aaPredicted RBP11.02□□□□□ -0.65
SSR4-205ENST00000447375 CR1P17927 2039 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 IGHV3-15A0A0B4J1V0 119 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 TMEM229AB2RXF0 380 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 GPRIN2O60269 458 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 EIF1BO60739 113 aaKnown RBP11.01□□□□□ -0.65
SSR4-205ENST00000447375 SMNDC1O75940 238 aaKnown RBP eCLIP11.01□□□□□ -0.65
SSR4-205ENST00000447375 IFNA14P01570 189 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 YES1P07947 543 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 PNMTP11086 282 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 AGTR1P30556 359 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 KDELR2P33947 212 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 UGT2B10P36537 528 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 CD79BP40259 229 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 OR2B6P58173 313 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 PSME3P61289 254 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 SLC35A1P78382 337 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 BNIP2Q12982 314 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 PDK3Q15120 406 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 OR1Q1Q15612 314 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 TMEM201Q5SNT2 666 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 ULK3Q6PHR2 472 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 ZNF704Q6ZNC4 412 aaPredicted RBP11.01□□□□□ -0.65
SSR4-205ENST00000447375 RANBP3LQ86VV4 465 aaPredicted RBP11.01□□□□□ -0.65
SSR4-205ENST00000447375 ZNF611Q8N823 705 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 OR6T1Q8NGN1 323 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 SLC26A7Q8TE54 656 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 SLC38A4Q969I6 547 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 ZHX1-C8orf76Q96EF9 292 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 TRMT61AQ96FX7 289 aaKnown RBP11.01□□□□□ -0.65
SSR4-205ENST00000447375 PSD2Q9BQI7 771 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 TACO1Q9BSH4 297 aaKnown RBP11.01□□□□□ -0.65
SSR4-205ENST00000447375 OPN3Q9H1Y3 402 aaPredicted RBP11.01□□□□□ -0.65
SSR4-205ENST00000447375 TMEM27Q9HBJ8 222 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 ARL8BQ9NVJ2 186 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 ELOVL5Q9NYP7 299 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 KLHL9Q9P2J3 617 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 GMPR2Q9P2T1 348 aaKnown RBP11.01□□□□□ -0.65
SSR4-205ENST00000447375 ABCD2Q9UBJ2 740 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 RPS6KB2Q9UBS0 482 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 LPAR3Q9UBY5 353 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 PROCRQ9UNN8 238 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 LAMP3Q9UQV4 416 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 USF3Q68DE3 2245 aa11.01□□□□□ -0.65
SSR4-205ENST00000447375 IGKV3D-15A0A087WSY6 115 aa11□□□□□ -0.65
SSR4-205ENST00000447375 A0A0B4J2E0 115 aa11□□□□□ -0.65
SSR4-205ENST00000447375 A0A1B0GX12 115 aa11□□□□□ -0.65
SSR4-205ENST00000447375 LIPT2A6NK58 231 aa11□□□□□ -0.65
SSR4-205ENST00000447375 ELOA3DA6NLF2 546 aaPredicted RBP11□□□□□ -0.65
SSR4-205ENST00000447375 ZNF724A8MTY0 619 aa11□□□□□ -0.65
SSR4-205ENST00000447375 M0R3H8 397 aa11□□□□□ -0.65
SSR4-205ENST00000447375 ACVR1BP36896 505 aa11□□□□□ -0.65
SSR4-205ENST00000447375 NCALDP61601 193 aa11□□□□□ -0.65
SSR4-205ENST00000447375 RPS4XP62701 263 aaKnown RBP11□□□□□ -0.65
SSR4-205ENST00000447375 EGR4Q05215 589 aa11□□□□□ -0.65
SSR4-205ENST00000447375 RASGEF1BQ0VAM2 473 aa11□□□□□ -0.65
SSR4-205ENST00000447375 CEACAM7Q14002 265 aa11□□□□□ -0.65
SSR4-205ENST00000447375 KRT72Q14CN4 511 aa11□□□□□ -0.65
SSR4-205ENST00000447375 NPTX1Q15818 432 aa11□□□□□ -0.65
SSR4-205ENST00000447375 ELOA3BQ3SY89 546 aa11□□□□□ -0.65
SSR4-205ENST00000447375 ALG10BQ5I7T1 473 aa11□□□□□ -0.65
SSR4-205ENST00000447375 ABLIM2Q6H8Q1 611 aa11□□□□□ -0.65
SSR4-205ENST00000447375 LSRQ86X29 649 aaPredicted RBP11□□□□□ -0.65
SSR4-205ENST00000447375 TUSC5Q8IXB3 177 aa11□□□□□ -0.65
SSR4-205ENST00000447375 FITM2Q8N6M3 262 aa11□□□□□ -0.65
SSR4-205ENST00000447375 CCDC197Q8NCU1 140 aa11□□□□□ -0.65
SSR4-205ENST00000447375 ELOA3Q8NG57 546 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms