RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CSNK2A2P19784 350 aaPredicted RBP12.82□□□□□ -0.36
VPS52-212ENST00000445902 ACTC1P68032 377 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 ACTA1P68133 377 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 OR1Q1Q15612 314 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 ODF4Q2M2E3 257 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 C9orf131Q5VYM1 1079 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 DPPA4Q7L190 304 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 PARS2Q7L3T8 475 aaKnown RBP12.82□□□□□ -0.36
VPS52-212ENST00000445902 SAGE1Q9NXZ1 904 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 KCNK7Q9Y2U2 307 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 ZNF337Q9Y3M9 751 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
VPS52-212ENST00000445902 TRAPPC13A5PLN9 417 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 CCSO14618 274 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 EIF3GO75821 320 aaKnown RBP eCLIP12.81□□□□□ -0.36
VPS52-212ENST00000445902 RBBP9O75884 186 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 UBBP0CG47 229 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 UBCP0CG48 685 aaKnown RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 LIPCP11150 499 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 GTF2F2P13984 249 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 MGMTP16455 207 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 NDUFS1P28331 727 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 BDKRB2P30411 391 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 RPS27AP62979 156 aaKnown RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 UBA52P62987 128 aaKnown RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 KRT33BQ14525 404 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 NDUFAF7Q7L592 441 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 TMPRSS12Q86WS5 348 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 GLB1L2Q8IW92 636 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 ACOT4Q8N9L9 421 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 SFXN5Q8TD22 340 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 GAL3ST1Q99999 423 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 UTP23Q9BRU9 249 aaKnown RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 OR52A5Q9H2C5 316 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 FBXO34Q9NWN3 711 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 SGCEO43556 437 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 EIF4E2O60573 245 aaKnown RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 OLFM2O95897 454 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 MAS1P04201 325 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 NANOS3P60323 173 aaKnown RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 CSNK1G2P78368 415 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 SRSF3P84103 164 aaKnown RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 DEFB115Q30KQ5 88 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 TPGS2Q68CL5 300 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 MOB3CQ70IA8 216 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 ADIPOR2Q86V24 386 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 NPAS4Q8IUM7 802 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 LURAP1LQ8IV03 231 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 DCUN1D3Q8IWE4 304 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 OR4N5Q8IXE1 308 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 SLC35F2Q8IXU6 374 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 CDK20Q8IZL9 346 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 OR6K6Q8NGW6 343 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 OR14A16Q8NHC5 309 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 SOCS4Q8WXH5 440 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 HAVCR1Q96D42 359 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 SEC22AQ96IW7 307 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 C10orf90Q96M02 699 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 PELI2Q9HAT8 420 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 CACYBPQ9HB71 228 aaKnown RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 MEPEQ9NQ76 525 aaPredicted RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 IL36AQ9UHA7 158 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 FBXO4Q9UKT5 387 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 RFPL4AA6NLU0 287 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 RFPL4AL1F8VTS6 287 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 PEX12O00623 359 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 TAF13Q15543 124 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 GXYLT1Q4G148 440 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 RANBP3LQ86VV4 465 aaPredicted RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 BEST3Q8N1M1 668 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 C12orf45Q8N5I9 185 aaPredicted RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 THAP6Q8TBB0 222 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 RGP1Q92546 391 aaPredicted RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 ACTRT3Q9BYD9 372 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 STARD7Q9NQZ5 370 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 CALML5Q9NZT1 146 aa12.81□□□□□ -0.36
VPS52-212ENST00000445902 ZNF346Q9UL40 294 aaKnown RBP12.81□□□□□ -0.36
VPS52-212ENST00000445902 OR6C76A6NM76 312 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 ZFPL1O95159 310 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 PAK4O96013 591 aaPredicted RBP12.8□□□□□ -0.36
VPS52-212ENST00000445902 CRYBA1P05813 215 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 H2AFB1P0C5Y9 115 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 PPIAP62937 165 aaKnown RBP12.8□□□□□ -0.36
VPS52-212ENST00000445902 S100A12P80511 92 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 MRPL2Q5T653 305 aaKnown RBP12.8□□□□□ -0.36
VPS52-212ENST00000445902 RPL22L1Q6P5R6 122 aaKnown RBP12.8□□□□□ -0.36
VPS52-212ENST00000445902 UNQ6126/PRO20091Q6UXV3 157 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 LINC01555Q8NAE3 123 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 OR7G2Q8NG99 324 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 SFT2D1Q8WV19 159 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 DTD2Q96FN9 168 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 CNN2Q99439 309 aaKnown RBP12.8□□□□□ -0.36
VPS52-212ENST00000445902 VRK1Q99986 396 aaPredicted RBP12.8□□□□□ -0.36
VPS52-212ENST00000445902 POFUT1Q9H488 388 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 ARID1AO14497 2285 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 IGKV1-8A0A0C4DH67 115 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 A0A1W2PPV9 198 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 TMEM218A2RU14 115 aa12.8□□□□□ -0.36
VPS52-212ENST00000445902 SULT1C2O00338 296 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms