RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 BBS10Q8TAM1 723 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 MAL2Q969L2 176 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 PAIP1Q9H074 479 aaKnown RBP18.4■□□□□ 0.54
VSX1-206ENST00000444511 BCL2L10Q9HD36 194 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 A4GALTQ9NPC4 353 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 OBP2BQ9NPH6 170 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 MOKQ9UQ07 419 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 RASD1Q9Y272 281 aa18.4■□□□□ 0.54
VSX1-206ENST00000444511 OR6C65A6NJZ3 312 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 TMEM229AB2RXF0 380 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 NPIPB7O75200 414 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 GTF2E2P29084 291 aaKnown RBP18.39■□□□□ 0.53
VSX1-206ENST00000444511 APOBEC3AP31941 199 aaPredicted RBP18.39■□□□□ 0.53
VSX1-206ENST00000444511 SELENOPP49908 381 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 HOXC5Q00444 222 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 FADDQ13158 208 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 NIPAL3Q6P499 406 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 EPGNQ6UW88 154 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 GOLGA6L1Q8N7Z2 621 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 SLC25A36Q96CQ1 311 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 RPS6KB2Q9UBS0 482 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 PMF1-BGLAPU3KQ54 211 aa18.39■□□□□ 0.53
VSX1-206ENST00000444511 ELOA3DA6NLF2 546 aaPredicted RBP18.38■□□□□ 0.53
VSX1-206ENST00000444511 LGI1O95970 557 aa18.38■□□□□ 0.53
VSX1-206ENST00000444511 UBE2NP61088 152 aaKnown RBP18.38■□□□□ 0.53
VSX1-206ENST00000444511 LGALS3BPQ08380 585 aa18.38■□□□□ 0.53
VSX1-206ENST00000444511 ELOA3BQ3SY89 546 aa18.38■□□□□ 0.53
VSX1-206ENST00000444511 TBRG1Q3YBR2 411 aa18.38■□□□□ 0.53
VSX1-206ENST00000444511 ZNF525Q8N782 197 aa18.38■□□□□ 0.53
VSX1-206ENST00000444511 ELOA3Q8NG57 546 aa18.38■□□□□ 0.53
VSX1-206ENST00000444511 OR1K1Q8NGR3 316 aa18.38■□□□□ 0.53
VSX1-206ENST00000444511 MFSD8Q8NHS3 518 aa18.38■□□□□ 0.53
VSX1-206ENST00000444511 SLC35B4Q969S0 331 aa18.38■□□□□ 0.53
VSX1-206ENST00000444511 BOD1Q96IK1 185 aa18.38■□□□□ 0.53
VSX1-206ENST00000444511 ALKBH3Q96Q83 286 aaPredicted RBP18.38■□□□□ 0.53
VSX1-206ENST00000444511 KCNS3Q9BQ31 491 aa18.38■□□□□ 0.53
VSX1-206ENST00000444511 POLR3GO15318 223 aaPredicted RBP18.37■□□□□ 0.53
VSX1-206ENST00000444511 GPRIN2O60269 458 aa18.37■□□□□ 0.53
VSX1-206ENST00000444511 PNMTP11086 282 aa18.37■□□□□ 0.53
VSX1-206ENST00000444511 BMP2P12643 396 aa18.37■□□□□ 0.53
VSX1-206ENST00000444511 RPS5P46782 204 aaKnown RBP18.37■□□□□ 0.53
VSX1-206ENST00000444511 EPHX4Q8IUS5 362 aa18.37■□□□□ 0.53
VSX1-206ENST00000444511 FAM168AQ92567 244 aa18.37■□□□□ 0.53
VSX1-206ENST00000444511 TCF7L2Q9NQB0 619 aa18.37■□□□□ 0.53
VSX1-206ENST00000444511 CR1P17927 2039 aa18.37■□□□□ 0.53
VSX1-206ENST00000444511 A0A096LNT2 108 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 IGHV1-18A0A0C4DH31 117 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 A8MV72 311 aaPredicted RBP18.36■□□□□ 0.53
VSX1-206ENST00000444511 FTCDNL1E5RQL4 147 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 SLC25A16P16260 332 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 PAX7P23759 505 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 EFNA4P52798 201 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 BEND6Q5SZJ8 279 aaPredicted RBP18.36■□□□□ 0.53
VSX1-206ENST00000444511 HMBOX1Q6NT76 420 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 HIPK1Q86Z02 1210 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 KDM8Q8N371 416 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 FBXO17Q96EF6 278 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 KTI12Q96EK9 354 aaPredicted RBP18.36■□□□□ 0.53
VSX1-206ENST00000444511 C7orf26Q96N11 449 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 SLC38A2Q96QD8 506 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 TNFRSF13CQ96RJ3 184 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 PTDSS2Q9BVG9 487 aa18.36■□□□□ 0.53
VSX1-206ENST00000444511 SONP18583 2426 aaKnown RBP18.35■□□□□ 0.53
VSX1-206ENST00000444511 PLCE1Q9P212 2302 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 UPK3AO75631 287 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 TGDSO95455 350 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 CSF3P09919 207 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 ETS2P15036 469 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 ZNF43P17038 809 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 HOXB9P17482 250 aaPredicted RBP18.35■□□□□ 0.53
VSX1-206ENST00000444511 PRKAR1BP31321 381 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 MRPL19P49406 292 aaKnown RBP18.35■□□□□ 0.53
VSX1-206ENST00000444511 CLDN17P56750 224 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 EGR4Q05215 589 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 LOXL1Q08397 574 aaPredicted RBP18.35■□□□□ 0.53
VSX1-206ENST00000444511 TMEM249Q2WGJ8 235 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 GCNT6Q5T4J0 391 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 CXXC5Q7LFL8 322 aaKnown RBP18.35■□□□□ 0.53
VSX1-206ENST00000444511 NFKBIDQ8NI38 313 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 BCL2L2Q92843 193 aaPredicted RBP18.35■□□□□ 0.53
VSX1-206ENST00000444511 ZNF317Q96PQ6 595 aaPredicted RBP18.35■□□□□ 0.53
VSX1-206ENST00000444511 LINC00470Q9BZP3 86 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 SLC25A37Q9NYZ2 338 aa18.35■□□□□ 0.53
VSX1-206ENST00000444511 CHD3Q12873 2000 aaKnown RBP18.34■□□□□ 0.53
VSX1-206ENST00000444511 NR5A2O00482 541 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 OR2T1O43869 369 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 IFNA2P01563 188 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 CRYAAP02489 173 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 PPIBP23284 216 aaKnown RBP18.34■□□□□ 0.53
VSX1-206ENST00000444511 SH3BGRP55822 239 aaPredicted RBP18.34■□□□□ 0.53
VSX1-206ENST00000444511 ROR2Q01974 943 aaKnown RBP18.34■□□□□ 0.53
VSX1-206ENST00000444511 C1DQ13901 141 aaKnown RBP18.34■□□□□ 0.53
VSX1-206ENST00000444511 LRIF1Q5T3J3 769 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 ANKRD16Q6P6B7 361 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 BLOC1S3Q6QNY0 202 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 C5orf46Q6UWT4 87 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 C6orf89Q6UWU4 347 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 LINGO2Q7L985 606 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 KRT73Q86Y46 540 aa18.34■□□□□ 0.53
VSX1-206ENST00000444511 LRRC8CQ8TDW0 803 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms