RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 SLC25A15Q9Y619 301 aa17.66■□□□□ 0.42
LRCH3-208ENST00000443727 VPS13CQ709C8 3753 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 H7C1Q1 480 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 M0R1B8 84 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 TROVE2P10155 538 aaKnown RBP eCLIP17.65■□□□□ 0.42
LRCH3-208ENST00000443727 PAX1P15863 534 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 PTAFRP25105 342 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 HTR2AP28223 471 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 MPGP29372 298 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 MTPNP58546 118 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 GLIPR1L2Q4G1C9 344 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 METTL21CQ5VZV1 264 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 SLC22A25Q6T423 547 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 KLHL24Q6TFL4 600 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 RETREG3Q86VR2 466 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 LSMEM1Q8N8F7 131 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 C1orf162Q8NEQ5 155 aaPredicted RBP17.65■□□□□ 0.42
LRCH3-208ENST00000443727 TSPEARQ8WU66 669 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 SLC38A4Q969I6 547 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 TRMT61AQ96FX7 289 aaKnown RBP17.65■□□□□ 0.42
LRCH3-208ENST00000443727 SMR3AQ99954 134 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 PRR14Q9BWN1 585 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 C1QTNF6Q9BXI9 259 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 TMEM120AQ9BXJ8 343 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 ALG2Q9H553 416 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 TESQ9UGI8 421 aaKnown RBP17.65■□□□□ 0.42
LRCH3-208ENST00000443727 MGAT4BQ9UQ53 548 aa17.65■□□□□ 0.42
LRCH3-208ENST00000443727 ZFHX3Q15911 3703 aa17.64■□□□□ 0.42
LRCH3-208ENST00000443727 PDLIM1O00151 329 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 SMAD7O15105 426 aaKnown RBP17.64■□□□□ 0.41
LRCH3-208ENST00000443727 OR2T1O43869 369 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 SOD3P08294 240 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 P2RY4P51582 365 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 IL1RL1Q01638 556 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 RBBP4Q09028 425 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 C1DQ13901 141 aaKnown RBP17.64■□□□□ 0.41
LRCH3-208ENST00000443727 ULK3Q6PHR2 472 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 C5orf46Q6UWT4 87 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 C6orf89Q6UWU4 347 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 CLEC9AQ6UXN8 241 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 CREB3L2Q70SY1 520 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 COMTD1Q86VU5 262 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 RANBP3LQ86VV4 465 aaPredicted RBP17.64■□□□□ 0.41
LRCH3-208ENST00000443727 DEPDC4Q8N2C3 294 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 C17orf78Q8N4C9 275 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 SMYD1Q8NB12 490 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 SLC47A1Q96FL8 570 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 PTDSS2Q9BVG9 487 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 AMDHD2Q9Y303 409 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 MAGED1Q9Y5V3 778 aaPredicted RBP17.64■□□□□ 0.41
LRCH3-208ENST00000443727 USF3Q68DE3 2245 aa17.64■□□□□ 0.41
LRCH3-208ENST00000443727 TRIM64A6NGJ6 449 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 TRIM64BA6NI03 449 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 OR6C65A6NJZ3 312 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 FAM171A2A8MVW0 826 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 SHISA9B4DS77 424 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 FTCDNL1E5RQL4 147 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 ZNF587BE7ETH6 402 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 DANCRP0C864 163 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 ZNF43P17038 809 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 CD40P25942 277 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 EGR4Q05215 589 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 SELPLGQ14242 412 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 FAM91A1Q658Y4 838 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 NIPAL3Q6P499 406 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 Q71RC1 249 aaPredicted RBP17.63■□□□□ 0.41
LRCH3-208ENST00000443727 KDM8Q8N371 416 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 TAAR8Q969N4 342 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 RSPO3Q9BXY4 272 aaPredicted RBP17.63■□□□□ 0.41
LRCH3-208ENST00000443727 EVA1AQ9H8M9 152 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 SLC17A5Q9NRA2 495 aa17.63■□□□□ 0.41
LRCH3-208ENST00000443727 CADP27708 2225 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 TRAV36DV7A0A075B6V5 113 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 AIM2O14862 343 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 MFN2O95140 757 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 WNT11O96014 354 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 SELENOPP49908 381 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 PRPS1P60891 318 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 DMTNQ08495 405 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 SF3A3Q12874 501 aaKnown RBP eCLIP17.62■□□□□ 0.41
LRCH3-208ENST00000443727 OR1Q1Q15612 314 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 FAM69AQ5T7M9 428 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 NET1Q7Z628 596 aaPredicted RBP17.62■□□□□ 0.41
LRCH3-208ENST00000443727 PTOV1Q86YD1 416 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 EPHX4Q8IUS5 362 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 SLC30A8Q8IWU4 369 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 WDR31Q8NA23 367 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 COX4I2Q96KJ9 171 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 EPYCQ99645 322 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 AMBRA1Q9C0C7 1298 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 MRGBPQ9NV56 204 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 FGFR1OP2Q9NVK5 253 aa17.62■□□□□ 0.41
LRCH3-208ENST00000443727 NIPBLQ6KC79 2804 aaeCLIP17.61■□□□□ 0.41
LRCH3-208ENST00000443727 M0QX08 132 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 M0R082 166 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 OPN1SWP03999 348 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 VIMP08670 466 aaKnown RBP17.61■□□□□ 0.41
LRCH3-208ENST00000443727 NQO1P15559 274 aaKnown RBP17.61■□□□□ 0.41
LRCH3-208ENST00000443727 CBLP22681 906 aa17.61■□□□□ 0.41
LRCH3-208ENST00000443727 GRPRP30550 384 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms