RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 A0A1B0GX12 115 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 KRT34O76011 436 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 VAMP5O95183 116 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 CDH2P19022 906 aaPredicted RBP18.54■□□□□ 0.56
CDKN3-204ENST00000442975 CBLP22681 906 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 NKX6-1P78426 367 aaPredicted RBP18.54■□□□□ 0.56
CDKN3-204ENST00000442975 VMACQ2NL98 169 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 COQ5Q5HYK3 327 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 Q5PR19 223 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 INTS11Q5TA45 600 aaKnown RBP18.54■□□□□ 0.56
CDKN3-204ENST00000442975 FAM91A1Q658Y4 838 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 NANOGP8Q6NSW7 305 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 P2RY8Q86VZ1 359 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 KDM8Q8N371 416 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 ZIC4Q8N9L1 334 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 GPR32P1Q8NGA4 272 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 VANGL1Q8TAA9 524 aaPredicted RBP18.54■□□□□ 0.56
CDKN3-204ENST00000442975 TAAR8Q969N4 342 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 TAMM41Q96BW9 452 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 MCHR1Q99705 422 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 SH3GL1Q99961 368 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 ECSITQ9BQ95 431 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 SLCO5A1Q9H2Y9 848 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 NANOGQ9H9S0 305 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 NPAP1Q9NZP6 1156 aa18.54■□□□□ 0.56
CDKN3-204ENST00000442975 MTORP42345 2549 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 TRAV36DV7A0A075B6V5 113 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 M0R082 166 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 HOXC12P31275 282 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 SELENOPP49908 381 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 ZNF83P51522 516 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 CDH12P55289 794 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 DUSP7Q16829 419 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 FAM69AQ5T7M9 428 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 NIPAL3Q6P499 406 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 C5orf46Q6UWT4 87 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 OR8J3Q8NGG0 315 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 ZNF417Q8TAU3 575 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 TMEM171Q8WVE6 324 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 C10orf82Q8WW14 230 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 ALKBH3Q96Q83 286 aaPredicted RBP18.53■□□□□ 0.56
CDKN3-204ENST00000442975 ZNF587Q96SQ5 575 aaPredicted RBP18.53■□□□□ 0.56
CDKN3-204ENST00000442975 PIP5K1AQ99755 562 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 ARHGDIGQ99819 225 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 TMUB1Q9BVT8 246 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 EVA1AQ9H8M9 152 aa18.53■□□□□ 0.56
CDKN3-204ENST00000442975 DPRXA6NFQ7 191 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 CPSF4LA6NMK7 179 aaKnown RBP18.52■□□□□ 0.56
CDKN3-204ENST00000442975 AIM2O14862 343 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 OR2T1O43869 369 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 TPST2O60704 377 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 GRPRP30550 384 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 TGFBR3Q03167 851 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 LGALS3BPQ08380 585 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 C1DQ13901 141 aaKnown RBP18.52■□□□□ 0.56
CDKN3-204ENST00000442975 GABRA6Q16445 453 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 OR7E24Q6IFN5 339 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 CREB3L2Q70SY1 520 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 SSX8Q7RTT4 187 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 EPHX4Q8IUS5 362 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 C10orf53Q8N6V4 93 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 ZNF611Q8N823 705 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 POMGNT2Q8NAT1 580 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 PCYOX1LQ8NBM8 494 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 OR6T1Q8NGN1 323 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 NEUROG1Q92886 237 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 FBXW5Q969U6 566 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 EPYCQ99645 322 aa18.52■□□□□ 0.56
CDKN3-204ENST00000442975 A0A087WUJ7 227 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 PDLIM1O00151 329 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 ABCD4O14678 606 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 ARHGEF9O43307 516 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 LGI1O95970 557 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 NQO1P15559 274 aaKnown RBP18.51■□□□□ 0.55
CDKN3-204ENST00000442975 ZNF43P17038 809 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 MPGP29372 298 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 CDH11P55287 796 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 NPTX1Q15818 432 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 NRF1Q16656 503 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 SWT1Q5T5J6 900 aaKnown RBP18.51■□□□□ 0.55
CDKN3-204ENST00000442975 KLHL24Q6TFL4 600 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 KRTAP1-3Q8IUG1 177 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 RBM45Q8IUH3 476 aaKnown RBP18.51■□□□□ 0.55
CDKN3-204ENST00000442975 POU5F2Q8N7G0 328 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 C1orf162Q8NEQ5 155 aaPredicted RBP18.51■□□□□ 0.55
CDKN3-204ENST00000442975 RCN3Q96D15 328 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 ZNF317Q96PQ6 595 aaPredicted RBP18.51■□□□□ 0.55
CDKN3-204ENST00000442975 CXorf56Q9H5V9 222 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 GID8Q9NWU2 228 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 LAMP3Q9UQV4 416 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 SLC25A15Q9Y619 301 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 VPS13CQ709C8 3753 aa18.51■□□□□ 0.55
CDKN3-204ENST00000442975 FREM1Q5H8C1 2179 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 ZNF587BE7ETH6 402 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 FMO6PO60774 539 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 CD247P20963 164 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 GZMMP51124 257 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 CLDN17P56750 224 aa18.5■□□□□ 0.55
CDKN3-204ENST00000442975 ZNF672Q499Z4 452 aaPredicted RBP18.5■□□□□ 0.55
CDKN3-204ENST00000442975 SHEQ5VZ18 495 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms